Structural Classification of Proteins
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Family: Bacteriophage CII protein

Pfam 05269; a compact helix-swapped dimer of the canonical fold; includes the extra C-terminal teramerisation region (alpha-helix); in the tetramer-DNA complex only two of the four HTH motifs interact with DNA

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: lambda repressor-like DNA-binding domains [47412]
    core: 4 helices; folded leaf, closed
  4. Superfamily: lambda repressor-like DNA-binding domains [47413]
    link to SUPERFAMILY database - Superfamily
  5. Family: Bacteriophage CII protein [140520]
    Pfam 05269; a compact helix-swapped dimer of the canonical fold; includes the extra C-terminal teramerisation region (alpha-helix); in the tetramer-DNA complex only two of the four HTH motifs interact with DNA

Protein Domains:

  1. Regulatory protein cII [140521]
    1. Bacteriophage lambda [TaxId: 10710] [140522] (12)
      SQ P03042 2-80! SQ P03042 4-81
      1. 1zs4 picpic
        1. region a:4-81 [125585] picpiclink
      2. 1zs4 picpic
        automatically matched to 1ZS4 A:4-81
        1. region b:4-81 [125586] picpiclink
      3. 1zs4 picpic
        automatically matched to 1ZS4 A:4-81
        1. region c:4-81 [125587] picpiclink
      4. 1zs4 picpic
        automatically matched to 1ZS4 A:4-81
        1. region d:7-79 [125588] picpiclink
      5. 1xwr picpic
        complexed with ipa
        1. region a:2-80 [122406] picpiclink
      6. 1xwr picpic
        automatically matched to 1XWR A:2-80
        complexed with ipa
        1. region b:4-80 [122407] picpiclink
      7. 1xwr picpic
        automatically matched to 1XWR A:2-80
        complexed with ipa
        1. region c:4-79 [122408] picpiclink
      8. 1xwr picpic
        automatically matched to 1XWR A:2-80
        complexed with ipa
        1. region d:4-80 [122409] picpiclink
      9. 1zpq picpic
        automatically matched to 1XWR A:2-80
        1. region a:6-79 [125469] picpiclink
      10. 1zpq picpic
        automatically matched to 1XWR A:2-80
        1. region b:7-80 [125470] picpiclink
      11. 1zpq picpic
        automatically matched to 1XWR A:2-80
        1. region c:3-80 [125471] picpiclink
      12. 1zpq picpic
        automatically matched to 1XWR A:2-80
        1. region d:4-80 [125472] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk