Structural Classification of Proteins
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Family: TBP-associated factors, TAFs

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Histone-fold [47112]
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. Superfamily: Histone-fold [47113]
    link to SUPERFAMILY database - Superfamily
  5. Family: TBP-associated factors, TAFs [47134]

Protein Domains:

  1. TAF(II)42 [47135]
    TAFii42 and TAFii62 form heterotetramer similar to (H3-H4)2
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [47136] (1) picpic
  2. TAF(II)62 [47137]
    TAFii42 and TAFii62 form heterotetramer similar to (H3-H4)2
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [47138] (1) picpic
  3. TAF(II)18 [47139]
    1. Human (Homo sapiens) [TaxId: 9606] [47140] (2) picpic
  4. TAF(II)28 [47141]
    1. Human (Homo sapiens) [TaxId: 9606] [47142] (2) picpic
  5. TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain [81720]
    lacks the third helix, forms a heterodimer with TAF(II)-20 similar to H2A-H2B
    1. Human (Homo sapiens) [TaxId: 9606] [81721] (1) picpic
  6. TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain [81722]
    forms a heterodimer with TAF(II)-135 similar to H2A-H2B
    1. Human (Homo sapiens) [TaxId: 9606] [81723] (1) picpic
  7. Negative cofactor 2, NC2, alpha chain [63507]
    1. Human (Homo sapiens) [TaxId: 9606] [63508] (1) picpic
  8. Negative cofactor 2, NC2, beta chain [63509]
    1. Human (Homo sapiens) [TaxId: 9606] [63510] (1) picpic
  9. Nuclear transcription factor Y subunit beta (Nf-Yb3) [81724]
    forms a heterodimer with Nf-Yc2 similar to H2A/H2B
    1. Human (Homo sapiens) [TaxId: 9606] [81725] (1) picpic
  10. Nuclear transcription factor Y subunit gamma (Nf-Yc2) [81726]
    forms a heterodimer with Nf-Yb3 similar to H2A/H2B
    1. Human (Homo sapiens) [TaxId: 9606] [81727] (1) picpic
  11. Histone domain of Son of sevenless protein [101107]
    1. Human (Homo sapiens) [TaxId: 9606] [101108] (1) picpic
  12. Chrac-14 [140398]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [140399] (4) picpic
      SQ Q9V444 11-99
  13. Chrac-16 [140400]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [140401] (4) picpic
      SQ Q9V452 29-100
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk