Family: Ribosomal protein S15

contains additional N-terminal helix that forms a separate unit

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: S15/NS1 RNA-binding domain [47059]
   3 helices; irregular array
4. Superfamily: S15/NS1 RNA-binding domain [47060]
   uperfamily
5. Family: Ribosomal protein S15 [47064]
   contains additional N-terminal helix that forms a separate unit

Protein Domains:

1. Ribosomal protein S15 [47065]
   1. Bacillus stearothermophilus [TaxId: 1422] [47066] (1)
      1. 1a32
         1. chain a [16384]
   2. Thermus thermophilus [TaxId: 274] [47067] (42)
      SQ P80378
      1. 1kuq
         complex with an rRNA fragment
         complexed with so4; mutant
         1. chain a [84470]
      2. 2uub
         automatically matched to d1ab3__
         complexed with 6mz, cm0, k, mg, par, zn
         1. region o:2-89 [139946]
      3. 1fjg
         complexed with mg, par, scm, sry, zn
         1. chain o [16388]
      4. 1dk1
         complex with an rRNA fragment
         complexed with k, mg, na; mutant
         1. chain a [16385]
      5. 1j5e
         complexed with unx, zn
         1. chain o [71558]
      6. 2uxc
         automatically matched to d1ab3__
         complexed with k, mg, par, zn
         1. region o:2-89 [140018]
      7. 1f7y
         complex with an rRNA fragment
         complexed with k, mg, na
         1. chain a [16386]
      8. 2uuc
         automatically matched to d1ab3__
         complexed with 6mz, cm0, k, mg, par, zn
         1. region o:2-89 [139966]
      9. 2uua
         automatically matched to d1ab3__
         complexed with 6mz, cm0, k, mg, par, zn
         1. region o:2-89 [139926]
      10. 1xmq
          complexed with mg, par, t6a, zn
          1. chain o [115544]
      11. 1n32
          complexed with mg, par, psu, zn
          1. chain o [79884]
      12. 2uu9
          automatically matched to d1ab3__
          complexed with 6mz, cm0, k, mg, par, zn
          1. region o:2-89 [139906]
      13. 1xnr
          complexed with mg, par, zn
          1. chain o [115640]
      14. 1xnq
          complexed with mg, par, zn
          1. chain o [115618]
      15. 1hr0
          complexed with mg, zn
          1. chain o [16389]
      16. 1hnz
          complexed with hyg, mg, zn
          1. chain o [16390]
      17. 2j02
          automatically matched to d1ab3__
          complexed with 5mu, mg, par, zn
          1. region o:2-89 [137880]
      18. 2j00
          automatically matched to d1ab3__
          complexed with 5mu, mg, par, zn
          1. region o:2-89 [137853]
      19. 1xmo
          complexed with mg, mnu, par, t6a, zn
          1. chain o [115514]
      20. 1hnw
          complexed with mg, tac, zn
          1. chain o [16391]
      21. 2e5l
          automatically matched to d1ab3__
          complexed with zn
          1. region o:2-89 [132039]
      22. 1i94
          complexed with mg, wo2, zn
          1. chain o [62006]
      23. 1hnx
          complexed with mg, pcy, zn
          1. chain o [16392]
      24. 1n33
          complexed with mg, par, psu, zn
          1. chain o [79906]
      25. 2fkx
          automatically matched to d1ab3__
          1. region a:1-88 [133685]
      26. 2hhh
          automatically matched to d1ab3__
          complexed with ksg
          1. region o:2-89 [136491]
      27. 1i96
          complexed with mg, wo2, zn
          1. chain o [62050]
      28. 1n34
          complexed with zn
          1. chain o [79928]
      29. 1i97
          complexed with mg, tac, wo2, zn
          1. chain o [62073]
      30. 1n36
          complexed with zn
          1. chain o [79951]
      31. 1i95
          complexed with ede, mg, wo2, zn
          1. chain o [62028]
      32. 1ab3
          1. chain a [16395]
      33. 2f4v
          automatically matched to d1ab3__
          complexed with ab9, d2c, k, mg, zn
          1. region o:2-89 [132952]
      34. 2hgp
          automatically matched to d1ab3__
          1. region r:2-89 [136434]
      35. 2hgi
          automatically matched to d1ab3__
          1. region r:2-89 [136413]
      36. 2hgr
          automatically matched to d1ab3__
          1. region r:2-89 [136455]
      37. 2ow8
          automatically matched to d1ab3__
          complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
          1. region p:2-89 [139413]
      38. 1yl4
          automatically matched to d1ab3__
          1. region r:2-89 [123611]
      39. 2b64
          automatically matched to d1ab3__
          complexed with psu, yyg
          1. region o:2-89 [127947]
      40. 2b9o
          automatically matched to d1ab3__
          complexed with psu, yyg
          1. region o:2-89 [128177]
      41. 2b9m
          automatically matched to d1ab3__
          complexed with psu, yyg
          1. region o:2-89 [128140]
      42. 1g1x
          1. chain b [16393]
          2. chain g [16394]
   3. Escherichia coli [TaxId: 562] [158383] (10)
      SQ Q8X9M2 2-89
      1. 1vs5
         automatically matched to 2AVY O:1-88
         complexed with ksg, mg
         1. region o:1-88 [144449]
      2. 3df1
         automatically matched to 2AVY O:1-88
         complexed with hyg, mg
         1. region o:1-88 [157617]
      3. 3df3
         automatically matched to 2AVY O:1-88
         complexed with hyg, mg
         1. region o:1-88 [157671]
      4. 1vs7
         automatically matched to 2AVY O:1-88
         complexed with ksg, mg
         1. region o:1-88 [144490]
      5. 2avy
         Representative structure
         complexed with mg
         1. region o:1-88 [144856]
      6. 2aw7
         automatically matched to 2AVY O:1-88
         complexed with mg
         1. region o:1-88 [144899]
      7. 2i2p
         automatically matched to 2AVY O:1-88
         complexed with mg
         1. region o:1-88 [145434]
      8. 2i2u
         automatically matched to 2AVY O:1-88
         complexed with mg
         1. region o:1-88 [145476]
      9. 2vho
         automatically matched to 2AVY O:1-88
         complexed with mg
         1. region o:1-88 [153137]
      10. 2vhp
          automatically matched to 2AVY O:1-88
          complexed with mg
          1. region o:1-88 [153159]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk