Structural Classification of Proteins
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Fold: Putative DNA-binding domain

core: 3 helices; architecture is similar to that of the "winged helix" fold but topology is different

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Putative DNA-binding domain [46954]
    core: 3 helices; architecture is similar to that of the "winged helix" fold but topology is different

Superfamilies:

  1. Putative DNA-binding domain [46955] (7)
    link to SUPERFAMILY database - Superfamily
    1. Domains B1 and B5 of PheRS-beta, PheT [46956] (1) picpic
      duplication: contains two such domains related by pseudo dyad
    2. DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain [46959] (1) picpic
    3. Dachshund-homology domain [74693] (2) picpic
      Pfam 02437
    4. DNA-binding N-terminal domain of transcription activators [46962] (4) picpic
      includes a dimerisation, antiparallel coiled-coil subdomain
    5. Terminase gpNU1 subunit domain [74696] (1) picpic
    6. Excisionase-like [46891] (2) picpic
      kinked C-terminal helix
    7. N-terminal subdomain of bacterial translation initiation factor IF2 [89006] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk