Structural Classification of Proteins
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Protein: Retrovius gp41 protease-resistant core from Human immunodeficiency virus type 1 [TaxId: 11676]

Lineage:

  1. Root: scop
  2. Class: Coiled coil proteins [57942]
    Not a true class
  3. Fold: Stalk segment of viral fusion proteins [58063]
    core: trimeric coiled coil
  4. Superfamily: Virus ectodomain [58069]
    link to SUPERFAMILY database - Superfamily
  5. Family: Virus ectodomain [58070]
  6. Protein: Retrovius gp41 protease-resistant core [58071]
    coiled coil; biological unit: trimer
  7. Species: Human immunodeficiency virus type 1 [TaxId: 11676] [58072]

PDB Entry Domains:

  1. 1df4 picpic
    1. chain a [45719] picpiclink
  2. 2q5u picpic
    1. region a:1-45 [139884] picpiclink
    2. region b:1-45 [139885] picpiclink
    3. region c:1-45 [139886] picpiclink
  3. 1czq picpic
    fusion protein between gp41 and GCN4 fragments; complex with a d-peptide inhibitor of HIV-1 entry
    1. chain a [45720] picpiclink
  4. 2q3i picpic
    automatically matched to d1czqa_
    1. region a:1-45 [139794] picpiclink
  5. 1k33 picpic
    1. chain a [68092] picpiclink
  6. 1i5x picpic
    1. chain a [76736] picpiclink
  7. 1k34 picpic
    1. chain a [68093] picpiclink
  8. 1qr9 picpic
    1. chain a [45721] picpiclink
  9. 2ot5 picpic
    automatically matched to d1df5a_
    1. region a:1-67 [149008] picpiclink
  10. 1dlb picpic
    1. chain a [45722] picpiclink
  11. 1i5y picpic
    1. chain a [76737] picpiclink
  12. 1gzl picpic
    fusion protein between gp41 and GCN4 fragments; complex with a cell entry inhibitor
    1. chain a,c [76422] picpiclink
    2. chain b,d [76423] picpiclink
  13. 3cp1 picpic
    automatically matched to d1df5a_
    1. region a:11-78 [156885] picpiclink
  14. 2q7c picpic
    1. region a:1-45 [139887] picpiclink
    2. region b:1-45 [139888] picpiclink
    3. region c:1-45 [139889] picpiclink
  15. 1aik picpic
    1. chain n,c [45723] picpiclink
  16. 3cyo picpic
    automatically matched to d1df5a_
    1. region a:11-78 [157147] picpiclink
  17. 1f23 picpic
    1. chain a [59602] picpiclink
    2. chain b [59603] picpiclink
    3. chain c [59604] picpiclink
    4. chain d [59605] picpiclink
    5. chain e [59606] picpiclink
    6. chain f [59607] picpiclink
  18. 1qr8 picpic
    1. chain a [45724] picpiclink
  19. 1env picpic
    1. chain a [45726] picpiclink
  20. 1szt picpic
    1. chain a [45725] picpiclink
  21. 1fav picpic
    fusion protein between gp41 and GCN4 fragments; complex with a cell entry inhibitor
    1. chain a,c [45728] picpiclink
  22. 1df5 picpic
    1. chain a [45727] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk