Structural Classification of Proteins
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Superfamily: SNARE fusion complex

tetrameric parallel coiled coil
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Coiled coil proteins [57942]
    Not a true class
  3. Fold: Parallel coiled-coil [57943]
    this is not a true fold; includes oligomers of shorter identical helices
  4. Superfamily: SNARE fusion complex [58038]
    tetrameric parallel coiled coil
    link to SUPERFAMILY database - Superfamily

Families:

  1. SNARE fusion complex [58039] (18)
    1. Synaptobrevin [88903]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88904] (3) picpic
      2. Longfin squid (Loligo pealei) [TaxId: 6621] [88905] (1) picpic
      3. Saccharomyces cerevisiae [TaxId: 4932] [161253] (1) picpic
    2. Endobrevin [88906]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88907] (1) picpic
    3. Syntaxin 1A [88908]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88909] (6) picpic
        SQ P32851 196-259
        a globular structure of a larger fragment containing this region is available; (1dn1), chain B
      2. Longfin squid (Loligo pealei) [TaxId: 6621] [88910] (1) picpic
      3. Saccharomyces cerevisiae [TaxId: 4932] [161254] (3) picpic
    4. Syntaxin 7 [88911]
      complex with endobrevin, VTI1B and syntaxin 8
      1. Mouse (Mus musculus) [TaxId: 10090] [88912] (1) picpic
    5. Syntaxin 8 [88913]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88914] (1) picpic
    6. Synaptosomal-associated protein SNAP-23 [90240]
      1. Human (Homo sapiens) [TaxId: 9606] [90241] (1) picpic
      2. Saccharomyces cerevisiae [TaxId: 4932] [161255] (1) picpic
    7. Synaptosomal-associated protein SNAP-25 [88915]
      provides up to two different helical regions to synaptic fusion complexes
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88916] (4) picpic
        SQ P13795 7-83; 142-204 # identical sequences to human species
      2. Human (Homo sapiens) [TaxId: 9606] [88917] (2) picpic
        SQ P60880 146-204 # identical sequence to rat species
      3. Longfin squid (Loligo pealei) [TaxId: 6621] [88918] (1) picpic
    8. Vesicle transport v-SNARE protein VTI1b [88919]
      1. Mouse (Mus musculus) [TaxId: 10090] [88920] (1) picpic
    9. Complexin [88921]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [88922] (1) picpic
    10. Synaphin [88923]
      1. Longfin squid (Loligo pealei) [TaxId: 6621] [88924] (1) picpic
    11. M-tomosyn [111467]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [111468] (1) picpic
        SQ Q9Z152
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk