Structural Classification of Proteins
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Superfamily: Ran binding protein zinc finger-like

contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Rubredoxin-like [57769]
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. Superfamily: Ran binding protein zinc finger-like [90209]
    contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
    link to SUPERFAMILY database - Superfamily

Families:

  1. Ran binding protein zinc finger-like [90210] (6)
    1. Znf265, first zinc-finger domain [90211]
      1. Human (Homo sapiens) [TaxId: 9606] [90212] (1)
        1. 1n0z picpic
          complexed with zn; mutant
          1. chain a [85247] picpiclink
    2. Npl4 [90215]
      a ubiquitin-interacting domain
      1. Rat (Rattus norvegicus) [TaxId: 10116] [90216] (2)
        1. 1q5w picpicxref
          complexed with zn
          1. chain a [95945] picpiclink
        2. 1nj3 picpic
          complexed with zn
          1. chain a [85761] picpiclink
    3. MDM4 [144196]
      1. Human (Homo sapiens) [TaxId: 9606] [144197] (1)
        SQ O15151 300-340
        1. 2cr8 picpic
          complexed with zn
          1. region a:8-48 [130734] picpiclink
    4. MDM2 [144198]
      1. Human (Homo sapiens) [TaxId: 9606] [144199] (2)
        SQ Q00987 290-335
        1. 2c6a picpic
          complexed with zn
          1. region a:290-335 [129987] picpiclink
        2. 2c6b picpic
          automatically matched to 2C6A A:290-335
          complexed with zn
          1. region a:290-335 [129988] picpiclink
    5. Vacuolar protein-sorting-associated protein 36, VPS36 [161173]
      1. Saccharomyces cerevisiae [TaxId: 4932] [161174] (2)
        SQ Q06696 115-161
        1. 2j9u picpicxrefxref
          complexed with zn
          1. region b:115-161 [145677] picpiclink
        2. 2j9u picpicxrefxref
          automatically matched to 2J9U B:115-161
          complexed with zn
          1. region d:115-161 [145678] picpiclink
    6. Nuclear pore complex protein nup153 [161175]
      1. Human (Homo sapiens) [TaxId: 9606] [161176] (1)
        SQ P49790 722-750
        1. 2gqe picpic
          2nd ZnF domain
          complexed with zn
          1. region a:3-31 [147156] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk