Structural Classification of Proteins
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Family: LDL receptor-like module

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: LDL receptor-like module [57423]
    disulfide-rich calcium-binding fold
  4. Superfamily: LDL receptor-like module [57424]
    link to SUPERFAMILY database - Superfamily
  5. Family: LDL receptor-like module [57425]

Protein Domains:

  1. Ligand-binding domain of low-density lipoprotein receptor [57426]
    1. Human (Homo sapiens) [TaxId: 9606] [57427] (13)
      SQ P01130 272-353
      1. 2fcw picpicxref
        automatically matched to d1n7da6
        complexed with ca, mpd, na; mutant
        1. region b:86-124 [133289] picpiclink
      2. 2fcw picpicxref
        automatically matched to d1n7da7
        complexed with ca, mpd, na; mutant
        1. region b:125-163 [133290] picpiclink
      3. 1ajj picpic
        fifth module
        complexed with ca, so4
        1. chain a [44609] picpiclink
      4. 1j8e picpic
        seventh module
        complexed with ca; mutant
        1. chain a [66437] picpiclink
      5. 1f5y picpic
        a concatemer of the first and second modules
        complexed with ca
        1. region a:1-44 [44610] picpiclink
        2. region a:45-85 [44611] picpiclink
      6. 1f8z picpic
        sixth module
        complexed with ca
        1. chain a [44612] picpiclink
      7. 1d2l picpic
        complement-like repeat cr3
        1. chain a [44614] picpiclink
      8. 1ldl picpic
        first module
        1. chain a [44615] picpiclink
      9. 1xfe picpicxref
        complexed with ca
        1. region a:1-44 [115260] picpiclink
      10. 1cr8 picpic
        complement module 8
        complexed with ca
        1. chain a [44613] picpiclink
      11. 1ldr picpic
        second module
        1. chain a [44616] picpiclink
      12. 1d2j picpic
        sixth module
        complexed with ca; mutant
        1. chain a [44617] picpiclink
      13. 1n7d picpicxrefxref
        all but the first modules in the whole receptor structure context
        complexed with ca, keg, man, nag; mutant
        1. region a:44-83 [80240] picpiclink
        2. region a:84-124 [80241] picpiclink
        3. region a:125-174 [80242] picpiclink
        4. region a:175-211 [80243] picpiclink
        5. region a:212-251 [80244] picpiclink
        6. region a:252-295 [80245] picpiclink
  2. soluble Tva ectodomain, sTva47 [69953]
    the viral-binding domain of Tva
    1. Quail (Coturnix coturnix) [TaxId: 9091] [69954] (2)
      1. 1k7b picpic
        1. chain a [68266] picpiclink
      2. 1jrf picpic
        complexed with ca
        1. chain a [71824] picpiclink
  3. Very low-density lipoprotein receptor [103571]
    1. Human (Homo sapiens) [TaxId: 9606] [103572] (1)
      1. 1v9u picpicxref
        LDL-receptor class A domain 3
        complexed with ca, dao
        1. chain 5 [100553] picpiclink
  4. Hemoglobin linker chain l1 [144109]
    1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144110] (1)
      SQ Q9GV76 85-126
      1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ca, cmo, hem, zn
        1. region m:60-101 [135668] picpiclink
  5. Extracellular hemoglobin linker l2 subunit [144111]
    1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144112] (1)
      SQ Q2I743 98-138
      1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ca, cmo, hem, zn
        1. region n:61-101 [135671] picpiclink
  6. Extracellular hemoglobin linker l3 subunit [144113]
    1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144114] (1)
      SQ Q2I742 78-118
      1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ca, cmo, hem, zn
        1. region o:60-100 [135674] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk