Structural Classification of Proteins
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Fold: LDL receptor-like module

disulfide-rich calcium-binding fold

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: LDL receptor-like module [57423]
    disulfide-rich calcium-binding fold

Superfamilies:

  1. LDL receptor-like module [57424] (1)
    link to SUPERFAMILY database - Superfamily
    1. LDL receptor-like module [57425] (6)
      1. Ligand-binding domain of low-density lipoprotein receptor [57426]
        1. Human (Homo sapiens) [TaxId: 9606] [57427] (13)
          SQ P01130 272-353
          1. 2fcw picpicxref
            automatically matched to d1n7da6
            complexed with ca, mpd, na; mutant
            1. region b:86-124 [133289] picpiclink
          2. 2fcw picpicxref
            automatically matched to d1n7da7
            complexed with ca, mpd, na; mutant
            1. region b:125-163 [133290] picpiclink
          3. 1ajj picpic
            fifth module
            complexed with ca, so4
            1. chain a [44609] picpiclink
          4. 1j8e picpic
            seventh module
            complexed with ca; mutant
            1. chain a [66437] picpiclink
          5. 1f5y picpic
            a concatemer of the first and second modules
            complexed with ca
            1. region a:1-44 [44610] picpiclink
            2. region a:45-85 [44611] picpiclink
          6. 1f8z picpic
            sixth module
            complexed with ca
            1. chain a [44612] picpiclink
          7. 1d2l picpic
            complement-like repeat cr3
            1. chain a [44614] picpiclink
          8. 1ldl picpic
            first module
            1. chain a [44615] picpiclink
          9. 1xfe picpicxref
            complexed with ca
            1. region a:1-44 [115260] picpiclink
          10. 1cr8 picpic
            complement module 8
            complexed with ca
            1. chain a [44613] picpiclink
          11. 1ldr picpic
            second module
            1. chain a [44616] picpiclink
          12. 1d2j picpic
            sixth module
            complexed with ca; mutant
            1. chain a [44617] picpiclink
          13. 1n7d picpicxrefxref
            all but the first modules in the whole receptor structure context
            complexed with ca, keg, man, nag; mutant
            1. region a:44-83 [80240] picpiclink
            2. region a:84-124 [80241] picpiclink
            3. region a:125-174 [80242] picpiclink
            4. region a:175-211 [80243] picpiclink
            5. region a:212-251 [80244] picpiclink
            6. region a:252-295 [80245] picpiclink
      2. soluble Tva ectodomain, sTva47 [69953]
        the viral-binding domain of Tva
        1. Quail (Coturnix coturnix) [TaxId: 9091] [69954] (2)
          1. 1k7b picpic
            1. chain a [68266] picpiclink
          2. 1jrf picpic
            complexed with ca
            1. chain a [71824] picpiclink
      3. Very low-density lipoprotein receptor [103571]
        1. Human (Homo sapiens) [TaxId: 9606] [103572] (1)
          1. 1v9u picpicxref
            LDL-receptor class A domain 3
            complexed with ca, dao
            1. chain 5 [100553] picpiclink
      4. Hemoglobin linker chain l1 [144109]
        1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144110] (1)
          SQ Q9GV76 85-126
          1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with ca, cmo, hem, zn
            1. region m:60-101 [135668] picpiclink
      5. Extracellular hemoglobin linker l2 subunit [144111]
        1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144112] (1)
          SQ Q2I743 98-138
          1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with ca, cmo, hem, zn
            1. region n:61-101 [135671] picpiclink
      6. Extracellular hemoglobin linker l3 subunit [144113]
        1. Common earthworm (Lumbricus terrestris) [TaxId: 6398] [144114] (1)
          SQ Q2I742 78-118
          1. 2gtl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with ca, cmo, hem, zn
            1. region o:60-100 [135674] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk