Structural Classification of Proteins
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Superfamily: Non-globular alpha+beta subunits of globular proteins

not a true superfamily
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Non-globular alpha+beta subunits of globular proteins [56567]
    not a true fold
  4. Superfamily: Non-globular alpha+beta subunits of globular proteins [56568]
    not a true superfamily
    link to SUPERFAMILY database - Superfamily

Families:

  1. Phycoerythrin 545 alpha-subunits [56569] (1)
    consists of a long beta-hairpin and a single alpha-helix
    1. Phycoerythrin 545 alpha-subunits [56570]
      1. Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257] [56571] (5) picpic
        SQ P30943 38-104 ! SQ Q00433 53-128
  2. Virulence effector SptP domain [69868] (1)
    1. Virulence effector SptP domain [69869]
      1. Salmonella typhimurium [TaxId: 90371] [69870] (1) picpic
  3. Ubiquinol-cytochrome c reductase 8 kDa protein [90077] (1)
    beta-hairpin and a short alpha-helix bound to the core subunits
    1. Ubiquinol-cytochrome c reductase 8 kDa protein [90078]
      1. Cow (Bos taurus) [TaxId: 9913] [90079] (14) picpic
        SQ P13272 1-57 ! SQ P13272
        there are other PDB entries with lower resolution structures of the Ubiquinol-cytochrome c reductase complex, in which this subunit has incomplete and probably mistraced structure that is not classified in scop
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk