Superfamily: Pre-PUA domain

this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: Cystatin-like [54402]
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
4. Superfamily: Pre-PUA domain [88802]
   this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
   uperfamily

Families:

1. Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1)
   1. Archaeosine tRNA-guanine transglycosylase, C2 domain [88804]
      the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
      1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [88805] (4)
2. Hypothetical protein Ta1423, N-terminal domain [102820] (1)
   1. Hypothetical protein Ta1423, N-terminal domain [102821]
      this protein is related to the C-terminal part (domains C2 and C3) of Archaeosine tRNA-guanine transglycosylase
      1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [102822] (1)
3. Nip7p homolog, N-terminal domain [110832] (1)
   1. Nip7p homolog, N-terminal domain [110833]
      1. Human (Homo sapiens) [TaxId: 9606] [110834] (2)
         SQ Q9Y221
4. Hypothetical protein APE0525, N-terminal domain [143004] (1)
   1. Hypothetical protein APE0525, N-terminal domain [143005]
      1. Archaeon Aeropyrum pernix [TaxId: 56636] [143006] (3)
         SQ Q9YEQ6 1-90
5. AF0587 pre C-terminal domain-like [160053] (1)
   PfamB 006016
   1. Uncharacterized protein AF0587 [160054]
      1. Archaeoglobus fulgidus [TaxId: 2234] [160055] (1)
         SQ O29668 394-459

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk