Structural Classification of Proteins
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Superfamily: Pre-PUA domain

this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Cystatin-like [54402]
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. Superfamily: Pre-PUA domain [88802]
    this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
    link to SUPERFAMILY database - Superfamily

Families:

  1. Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1)
    1. Archaeosine tRNA-guanine transglycosylase, C2 domain [88804]
      the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
      1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [88805] (4)
        1. 1iq8 picpicxrefxref
          complexed with mg, zn
          1. region a:361-505 [83075] picpiclink
          2. region b:361-505 [83077] picpiclink
        2. 1it7 picpicxrefxref
          complexed with gun, mg, zn
          1. region a:361-505 [83079] picpiclink
          2. region b:361-505 [83081] picpiclink
        3. 1it8 picpicxrefxref
          complexed with mg, pq0, zn
          1. region a:361-505 [83083] picpiclink
          2. region b:361-505 [83085] picpiclink
        4. 1j2b picpicxrefxref
          complexed with mg, zn
          1. region a:361-505 [84012] picpiclink
          2. region b:361-505 [84015] picpiclink
  2. Hypothetical protein Ta1423, N-terminal domain [102820] (1)
    1. Hypothetical protein Ta1423, N-terminal domain [102821]
      this protein is related to the C-terminal part (domains C2 and C3) of Archaeosine tRNA-guanine transglycosylase
      1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [102822] (1)
        1. 1q7h picpicxref
          structural genomics
          complexed with zn
          1. region a:3-68 [96043] picpiclink
  3. Nip7p homolog, N-terminal domain [110832] (1)
    1. Nip7p homolog, N-terminal domain [110833]
      1. Human (Homo sapiens) [TaxId: 9606] [110834] (2)
        SQ Q9Y221
        1. 1sqw picpicxref
          automatically matched to d1t5ya2
          1. region a:1-94 [119034] picpiclink
        2. 1t5y picpicxref
          1. region a:1-94 [106496] picpiclink
  4. Hypothetical protein APE0525, N-terminal domain [143004] (1)
    1. Hypothetical protein APE0525, N-terminal domain [143005]
      1. Archaeon Aeropyrum pernix [TaxId: 56636] [143006] (3)
        SQ Q9YEQ6 1-90
        1. 2cx1 picpicxref
          automatically matched to 1ZS7 A:1-90
          complexed with tla
          1. region a:1-90 [130968] picpiclink
        2. 1zs7 picpicxref
          complexed with k, po4
          1. region a:1-90 [125594] picpiclink
        3. 2cx0 picpicxref
          automatically matched to 1ZS7 A:1-90
          complexed with so4
          1. region a:1-90 [130966] picpiclink
  5. AF0587 pre C-terminal domain-like [160053] (1)
    PfamB 006016
    1. Uncharacterized protein AF0587 [160054]
      1. Archaeoglobus fulgidus [TaxId: 2234] [160055] (1)
        SQ O29668 394-459
        1. 2q07 picpicxrefxref
          1. region a:394-459 [149983] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk