Structural Classification of Proteins
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Family: Ring hydroxylating beta subunit

Pfam 00866

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Cystatin-like [54402]
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. Superfamily: NTF2-like [54427]
    has a beta-alpha(2)-beta insertion after the main helix
    link to SUPERFAMILY database - Superfamily
  5. Family: Ring hydroxylating beta subunit [54438]
    Pfam 00866

Protein Domains:

  1. Naphthalene 1,2-dioxygenase beta subunit [54439]
    1. Pseudomonas putida [TaxId: 303] [54440] (16)
      1. 1o7n picpicxrefxref
        complexed with edo, fe, fes, ind, oxy, so4
        1. chain b [81164] picpiclink
      2. 2hmj picpicxrefxref
        automatically matched to d1eg9b_
        complexed with edo, fe, fes, so4; mutant
        1. region b:3-194 [136587] picpiclink
      3. 2hmo picpicxrefxref
        automatically matched to d1eg9b_
        complexed with 3nt, edo, fe, fes, so4
        1. region b:3-194 [136602] picpiclink
      4. 2hmm picpicxrefxref
        automatically matched to d1eg9b_
        complexed with an3, edo, fe, fes, so4; mutant
        1. region b:3-194 [136596] picpiclink
      5. 2hmk picpicxrefxref
        automatically matched to d1eg9b_
        complexed with edo, fe, fes, pey, so4; mutant
        1. region b:3-194 [136590] picpiclink
      6. 2hmn picpicxrefxref
        automatically matched to d1eg9b_
        complexed with an3, edo, fe, fes, so4; mutant
        1. region b:3-194 [136599] picpiclink
      7. 1eg9 picpicxrefxref
        complexed with fes, ind, of1, so4
        1. chain b [38120] picpiclink
      8. 1o7g picpicxrefxref
        complexed with edo, fe, fes, npy, so4
        1. chain b [81136] picpiclink
      9. 1uuv picpicxrefxref
        automatically matched to d1eg9b_
        complexed with edo, fe, fes, ind, no, so4
        1. region b:502-694 [119701] picpiclink
      10. 1o7m picpicxrefxref
        complexed with edo, fe, fes, oxy, so4
        1. chain b [81161] picpiclink
      11. 2hml picpicxrefxref
        automatically matched to d1eg9b_
        complexed with edo, fe, fes, pey, so4; mutant
        1. region b:3-194 [136593] picpiclink
      12. 1o7w picpicxrefxref
        complexed with edo, fe, fes, so4
        1. chain b [81170] picpiclink
      13. 1o7p picpicxrefxref
        complexed with edo, fe, fes, ndh, so4
        1. chain b [81167] picpiclink
      14. 1o7h picpicxrefxref
        complexed with edo, fe, fes, so4
        1. chain b [81139] picpiclink
      15. 1uuw picpicxrefxref
        automatically matched to d1eg9b_
        complexed with fe, fes, no, so4
        1. region b:502-694 [119704] picpiclink
      16. 1ndo picpicxrefxref
        complexed with fe, fes
        1. chain b [38121] picpiclink
        2. chain d [38122] picpiclink
        3. chain f [38123] picpiclink
    2. Rhodococcus sp. ncimb12038 [TaxId: 92694] [142996] (6)
      SQ Q7BSK6 6-172
      1. 2b1x picpicxrefxrefxrefxrefxrefxref
        complexed with fe, fes, mpd
        1. region b:513-679 [127677] picpiclink
      2. 2b1x picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X B:513-679
        complexed with fe, fes, mpd
        1. region d:513-679 [127680] picpiclink
      3. 2b1x picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X B:513-679
        complexed with fe, fes, mpd
        1. region f:513-679 [127683] picpiclink
      4. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X B:513-679
        complexed with fe, fes, ind
        1. region b:515-679 [127692] picpiclink
      5. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X B:513-679
        complexed with fe, fes, ind
        1. region d:515-679 [127695] picpiclink
      6. 2b24 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2B1X B:513-679
        complexed with fe, fes, ind
        1. region f:515-679 [127698] picpiclink
  2. Biphenyl dioxygenase small subunit BphA2 [110824]
    1. Rhodococcus sp. (strain RHA1) [TaxId: 101510] [110825] (2)
      SQ Q53123 11-187
      1. 1uli picpicxrefxref
        complexed with fe2, fes
        1. chain b [107923] picpiclink
        2. chain d [107926] picpiclink
        3. chain f [107929] picpiclink
      2. 1ulj picpicxrefxref
        complexed with bnl, fe2, fes
        1. chain b [107932] picpiclink
        2. chain d [107935] picpiclink
        3. chain f [107938] picpiclink
  3. Small subunit of cumene dioxygenase CumA2 [142997]
    1. Pseudomonas fluorescens [TaxId: 294] [142998] (1)
      SQ Q51744 6-186
      1. 1wql picpicxrefxref
        complexed with fe2, fes, oxy
        1. region b:5-186 [121172] picpiclink
  4. Nitrobenzene dioxygenase beta subunit, NBDO-beta [142999]
    1. Comamonas sp. JS765 [TaxId: 58226] [143000] (3)
      SQ Q8RTL3 1-194
      1. 2bmo picpicxrefxref
        complexed with edo, eoh, fe, fes, ni
        1. region b:1-194 [128806] picpiclink
      2. 2bmr picpicxrefxref
        automatically matched to 2BMO B:1-194
        complexed with 3nt, edo, eoh, fe, fes, ni
        1. region b:1-194 [128812] picpiclink
      3. 2bmq picpicxrefxref
        automatically matched to 2BMO B:1-194
        complexed with edo, eoh, fe, fes, nbz, ni
        1. region b:1-194 [128809] picpiclink
  5. Putative hydroxylase subunit Saro3860 [159980]
    1. Novosphingobium aromaticivorans [TaxId: 48935] [159981] (1)
      SQ A4XDU4 6-162
      1. 3eby picpic
        complexed with cl
        1. region a:6-162 [158087] picpiclink
  6. Benzoate 1,2-dioxygenase beta subunit BenB [159982]
    1. Burkholderia mallei [TaxId: 13373] [159983] (1)
      SQ Q62E64 1-163
      1. 3e99 picpic
        complexed with act
        1. region a:1-163 [158067] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk