Structural Classification of Proteins
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Family: VirB8-like

Pfam 04335

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Cystatin-like [54402]
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. Superfamily: NTF2-like [54427]
    has a beta-alpha(2)-beta insertion after the main helix
    link to SUPERFAMILY database - Superfamily
  5. Family: VirB8-like [160029]
    Pfam 04335

Protein Domains:

  1. Type IV secretion system protein VirB8 [160030]
    1. Agrobacterium tumefaciens [TaxId: 358] [160031] (2)
      SQ P17798 92-231
      1. 2cc3 picpic
        complexed with mpd
        1. region a:92-231 [146384] picpiclink
      2. 2cc3 picpic
        automatically matched to 2CC3 A:92-231
        complexed with mpd
        1. region b:92-231 [146385] picpiclink
    2. Brucella melitensis [TaxId: 29459] [160032] (5)
      SQ Q7CEG3 97-235
      1. 2bhm picpic
        1. region a:97-235 [146143] picpiclink
      2. 2bhm picpic
        automatically matched to 2BHM A:97-235
        1. region b:97-235 [146144] picpiclink
      3. 2bhm picpic
        automatically matched to 2BHM A:97-235
        1. region c:97-235 [146145] picpiclink
      4. 2bhm picpic
        automatically matched to 2BHM A:97-235
        1. region d:97-235 [146146] picpiclink
      5. 2bhm picpic
        automatically matched to 2BHM A:97-235
        1. region e:97-235 [146147] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk