Structural Classification of Proteins
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Fold: Molybdenum cofactor-binding domain

beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Molybdenum cofactor-binding domain [56002]
    beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops

Superfamilies:

  1. Molybdenum cofactor-binding domain [56003] (1)
    duplication: consists of 4 structural repeats arranged in 2 lobes
    contains one left-hand beta-alpha-beta unit per lobe
    link to SUPERFAMILY database - Superfamily
    1. Molybdenum cofactor-binding domain [56004] (8)
      1. Aldehyde oxidoreductase [56005]
        1. Desulfovibrio gigas [TaxId: 879] [56006] (3)
          SQ Q46509
          1. 1vlb picpicxrefxrefxref
            complexed with cl, fes, ipa, mg, pcd
            1. region a:311-907 [108742] picpiclink
          2. 1zcs picpicxrefxrefxref
            automatically matched to d1sija4
            complexed with ast, cl, fes, ipa, mg, pcd
            1. region a:311-907 [124915] picpiclink
          3. 1sij picpicxrefxrefxref
            complexed with ast, cl, fes, mg, pcd
            1. region a:311-907 [105584] picpiclink
        2. Desulfovibrio desulfuricans [TaxId: 876] [56007] (1)
          1. 1dgj picpicxrefxrefxref
            complexed with 2mo, fes, mcn
            1. region a:311-906 [41415] picpiclink
      2. Xanthine oxidase, C-terminal domain [56008]
        1. Cow (Bos taurus) [TaxId: 9913] [56009] (6)
          SQ P80457
          1. 1v97 picpicxrefxrefxrefxrefxref
            complexed with acy, ca, fad, fes, fyx, gol, mos, mte
            1. region a:695-1332 [108440] picpiclink
            2. region b:695-1332 [108446] picpiclink
          2. 1vdv picpicxrefxrefxrefxrefxref
            complexed with acy, ca, fad, fes, gol, mos, mte, ysh
            1. region a:695-1332 [113618] picpiclink
            2. region b:695-1332 [113624] picpiclink
          3. 1fo4 picpicxrefxrefxrefxrefxref
            complexed with ca, fad, fes, gol, mos, mte, sal
            1. region a:695-1332 [41416] picpiclink
            2. region b:695-1332 [41417] picpiclink
          4. 3b9j picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1fo4a5
            complexed with 290, ca, fad, fes, mos, mte
            1. region c:695-1328 [155005] picpiclink
          5. 1fiq picpicxrefxrefxrefxrefxref
            complexed with fad, fes, gol, mos, mte, sal
            1. region c:695-1315 [41418] picpiclink
          6. 1n5x picpicxrefxrefxrefxrefxref
            complexed with fad, fes, mos, mte, tei
            1. region a:695-1332 [85346] picpiclink
            2. region b:695-1332 [85352] picpiclink
      3. Xanthine dehydrogenase chain B, C-terminal domain [69813]
        1. Rhodobacter capsulatus [TaxId: 1061] [69814] (2)
          1. 1jro picpicxrefxrefxrefxrefxref
            complexed with ca, fad, fes, mos, mpn
            1. region b:124-777 [67142] picpiclink
            2. region d:124-777 [67148] picpiclink
            3. region f:124-777 [67154] picpiclink
            4. region h:124-777 [67160] picpiclink
          2. 1jrp picpicxrefxrefxrefxrefxref
            complexed with 141, ca, fad, fes, mos, mpn
            1. region b:124-777 [67166] picpiclink
            2. region d:124-777 [67172] picpiclink
            3. region f:124-777 [67178] picpiclink
            4. region h:124-777 [67184] picpiclink
      4. Carbon monoxide (CO) dehydrogenase molybdoprotein [56010]
        1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [56011] (6)
          1. 1n62 picpicxrefxrefxrefxrefxref
            complexed with cub, fad, fes, mcn, po4
            1. region b:147-809 [80093] picpiclink
            2. region e:147-809 [80099] picpiclink
          2. 1n60 picpicxrefxrefxrefxrefxref
            complexed with fad, fes, mcn, omo, po4
            1. region b:147-809 [80069] picpiclink
            2. region e:147-809 [80075] picpiclink
          3. 1n63 picpicxrefxrefxrefxrefxref
            complexed with cun, fad, fes, mcn, po4
            1. region b:147-809 [80105] picpiclink
            2. region e:147-809 [80111] picpiclink
          4. 1n61 picpicxrefxrefxrefxrefxref
            complexed with cun, fad, fes, mcn, po4
            1. region b:147-809 [80081] picpiclink
            2. region e:147-809 [80087] picpiclink
          5. 1n5w picpicxrefxrefxrefxrefxref
            complexed with cum, fad, fes, mcn, po4
            1. region b:147-809 [80048] picpiclink
            2. region e:147-809 [80054] picpiclink
          6. 1zxi picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1n5wb2
            complexed with cu, cum, fad, fes, mcn, po4
            1. region b:147-809 [125775] picpiclink
        2. Hydrogenophaga pseudoflava [TaxId: 47421] [56012] (2)
          1. 1ffv picpicxrefxrefxrefxrefxref
            complexed with aro, csz, fad, fes, pcd
            1. region b:147-803 [41421] picpiclink
            2. region e:147-803 [41422] picpiclink
          2. 1ffu picpicxrefxrefxrefxrefxref
            complexed with aro, cdp, csz, fad, fes
            1. region b:147-803 [41423] picpiclink
            2. region e:147-803 [41424] picpiclink
      5. Quinoline 2-oxidoreductase large subunit QorL [111178]
        1. Pseudomonas putida [TaxId: 303] [111179] (1)
          SQ P72224
          1. 1t3q picpicxrefxrefxrefxrefxref
            complexed with fad, fes, gol, mcn, smo, so4
            1. region b:166-786 [106370] picpiclink
            2. region e:166-786 [106376] picpiclink
      6. 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain [118109]
        1. Thauera aromatica [TaxId: 59405] [118110] (2)
          SQ O33819
          1. 1rm6 picpicxrefxrefxrefxrefxref
            complexed with cl, epe, fad, fes, fs4, k, na, pcd, so4
            1. region a:134-769 [111873] picpiclink
            2. region d:134-768 [111879] picpiclink
          2. 1sb3 picpicxrefxrefxrefxrefxref
            complexed with epe, fad, fes, fs4, pcd, so4
            1. region a:134-769 [112053] picpiclink
            2. region d:134-768 [112059] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk