Structural Classification of Proteins
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Family: GatB/GatE catalytic domain-like

N-terminal and C-terminal parts correspond to Pfam 02934 (GatB_N) and Pfam 01162 (GatB), respectively

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Glutamine synthetase/guanido kinase [55930]
    duplication: common core consists of two beta-alpha-beta2-alpha repeats
  4. Superfamily: Glutamine synthetase/guanido kinase [55931]
    link to SUPERFAMILY database - Superfamily
  5. Family: GatB/GatE catalytic domain-like [143812]
    N-terminal and C-terminal parts correspond to Pfam 02934 (GatB_N) and Pfam 01162 (GatB), respectively

Protein Domains:

  1. Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain [143813]
    1. Staphylococcus aureus [TaxId: 1280] [143814] (5)
      SQ P64201 2-293
      1. 2f2a picpicxrefxrefxref
        automatically matched to 2DF4 B:2-293
        complexed with gln, mg
        1. region b:4-293 [132803] picpiclink
      2. 2g5h picpicxrefxrefxref
        automatically matched to 2DF4 B:2-293
        complexed with mg
        1. region b:3-293 [134660] picpiclink
      3. 2dqn picpicxrefxrefxref
        automatically matched to 2DF4 B:2-293
        complexed with asn, mg
        1. region b:3-293 [131641] picpiclink
      4. 2df4 picpicxrefxrefxref
        complexed with mn
        1. region b:2-293 [131447] picpiclink
      5. 2g5i picpicxrefxrefxref
        automatically matched to 2DF4 B:2-293
        complexed with adp, mg
        1. region b:2-293 [134664] picpiclink
  2. Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE [143815]
    1. Methanobacterium thermoautotrophicum [TaxId: 145262] [143816] (2)
      SQ O26803 1-270,396-444
      1. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region c:1-270,c:396-444 [131309] picpiclink
      2. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2D6F C:1-270,C:396-444
        complexed with zn
        1. region d:1-270,d:396-444 [131312] picpiclink
    2. Pyrococcus abyssi [TaxId: 29292] [143817] (2)
      SQ Q9V0U0 5-276,408-456
      1. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with asp
        1. region c:5-276,c:408-456 [125495] picpiclink
      2. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 1ZQ1 C:5-276,C:408-456
        complexed with asp
        1. region d:5-276,d:408-456 [125498] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk