Structural Classification of Proteins
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Fold: YbaK/ProRS associated domain

core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: YbaK/ProRS associated domain [55825]
    core: alpha-beta-alpha-beta(2)-(alpha-beta)2-alpha-beta(2)-alpha-beta; 3 layers; bifurcated mixed sheet

Superfamilies:

  1. YbaK/ProRS associated domain [55826] (1)
    link to SUPERFAMILY database - Superfamily
    1. YbaK/ProRS associated domain [55827] (4)
      Pfam 04073
      1. Hypothetical protein HI1434 (YbaK homologue) [55828]
        1. Haemophilus influenzae [TaxId: 727] [55829] (2)
          1. 1dbx picpic
            structural genomics
            1. chain a [40928] picpiclink
            2. chain b [40929] picpiclink
          2. 1dbu picpic
            structural genomics
            complexed with hg
            1. chain a [40930] picpiclink
      2. Hypothetical protein CC0111 [103220]
        annotated as putative DNA-binding protein
        1. Caulobacter crescentus [TaxId: 155892] [103221] (1)
          1. 1vjf picpic
            structural genomics
            complexed with cl, gol
            1. chain a [100809] picpiclink
      3. Hypothetical protein Atu3699 [111136]
        1. Agrobacterium tumefaciens, strain C58 [TaxId: 358] [111137] (1)
          SQ Q8U9M7
          1. 1vki picpic
            Structural genomics target
            complexed with gol, so4
            1. chain a [108664] picpiclink
            2. chain b [108665] picpiclink
      4. Hypothetical protein APE2540 [118085]
        1. Aeropyrum pernix [TaxId: 56636] [118086] (1)
          SQ Q9Y8U3
          1. 1wdv picpic
            Structural genomics targe
            1. chain a [114539] picpiclink
            2. chain b [114540] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk