Structural Classification of Proteins
home mail help root up expand collapse

Fold: YrdC/RibB

core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: YrdC/RibB [55820]
    core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other

Superfamilies:

  1. YrdC/RibB [55821] (2)
    link to SUPERFAMILY database - Superfamily
    1. YrdC-like [55822] (3)
      contains two additional strands in the C-terminal extension
      1. Hypothetical protein YrdC [55823]
        1. Escherichia coli [TaxId: 562] [55824] (1) picpic
      2. Hypothetical protein YciO [75529]
        1. Escherichia coli [TaxId: 562] [75530] (2) picpic
      3. Hypothetical protein MTH1692 [75531]
        1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [75532] (1) picpic
    2. 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64372] (4)
      contains one additional helix in the C-terminal extension
      1. 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64373]
        1. Escherichia coli [TaxId: 562] [64374] (3) picpic
        2. Magnaporthe grisea [TaxId: 148305] [75533] (5) picpic
        3. Archaeon Methanocaldococcus jannaschii [TaxId: 2190] [103219] (3) picpic
          SQ Q60364
        4. Candida albicans [TaxId: 5476] [111135] (4) picpic
          SQ Q5A3V6
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk