Structural Classification of Proteins
Fold: Ribonuclease PH domain 2-like
beta(2)-alpha-beta(2)-alpha; 3 layers: alpha/beta/alpha; antiparallel sheet: order 2134
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
Ribonuclease PH domain 2-like
[55665]
beta(2)-alpha-beta(2)-alpha; 3 layers: alpha/beta/alpha; antiparallel sheet: order 2134
Superfamilies:
Ribonuclease PH domain 2-like
[55666] (1)
uperfamily
Ribonuclease PH domain 2-like
[55667] (14)
Ribonuclease PH, domain 2 [103150]
Aquifex aeolicus
[TaxId: 63363]
[103151] (4)
1uds
complexed with po4, so4; mutant
region a:151-255
[99220]
1udq
complexed with po4, so4; mutant
region a:151-255
[99218]
1udo
complexed with po4, so4; mutant
region a:151-255
[99216]
1udn
complexed with po4, so4
region a:151-255
[99214]
Pseudomonas aeruginosa
[TaxId: 287]
[103152] (2)
1r6l
complexed with nhe, so4
region a:152-239
[97154]
1r6m
complexed with po4
region a:152-239
[97156]
Bacillus subtilis
[TaxId: 1423]
[103153] (3)
1oys
mutant
region a:152-237
[93759]
1oyp
complexed with sul
region a:152-243
[93735]
region b:152-243
[93737]
region c:152-243
[93739]
region d:152-243
[93741]
region e:152-243
[93743]
region f:152-243
[93745]
1oyr
complexed with cd, sul
region a:152-242
[93747]
region b:152-242
[93749]
region c:152-242
[93751]
region d:152-242
[93753]
region e:152-242
[93755]
region f:152-242
[93757]
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 [55668]
duplication of two-domain units formed by domains 1-2 and 4-5
Streptomyces antibioticus
[TaxId: 1890]
[55669] (2)
1e3h
complexed with so4
region a:152-262
[40695]
region a:483-578
[40696]
1e3p
complexed with so4, wo4
region a:152-262
[40697]
region a:483-578
[40698]
Exosome complex exonuclease RRP45 [160586]
Human (Homo sapiens)
[TaxId: 9606]
[160587] (1)
SQ
Q86Y41
185-302
2nn6
mutant
region a:185-302
[148296]
Exosome complex exonuclease RRP42 [160588]
Human (Homo sapiens)
[TaxId: 9606]
[160589] (1)
SQ
Q15024
192-285
2nn6
mutant
region e:192-285
[148304]
Exosome complex exonuclease 1, ECX1 [160590]
Sulfolobus solfataricus
[TaxId: 2287]
[160591] (50)
SQ
Q9UXC2
156-241! SQ
Q9UXC2
156-248
2je6
complexed with 1pe, cl, peg; mutant
region b:156-241
[147994]
2jea
automatically matched to 2JE6 B:156-241
complexed with 1pe; mutant
region b:156-241
[148011]
2jeb
automatically matched to 2JE6 B:156-241
complexed with 1pe, cl, mn; mutant
region b:156-241
[148018]
2br2
complexed with cl
region b:156-248
[146168]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region d:156-248
[146172]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region f:156-248
[146176]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region h:156-248
[146180]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region j:156-248
[146184]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region l:156-248
[146188]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region n:156-248
[146192]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region p:156-248
[146196]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region r:156-248
[146200]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region t:156-248
[146204]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region v:156-248
[146208]
2br2
automatically matched to 2BR2 B:156-248
complexed with cl
region x:156-248
[146212]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region b:156-248
[146231]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region d:156-248
[146235]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region f:156-248
[146239]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region h:156-248
[146243]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region j:156-248
[146247]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region l:156-248
[146251]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region n:156-248
[146255]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region p:156-248
[146259]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region r:156-248
[146263]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region t:156-248
[146267]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region v:156-248
[146271]
2c37
automatically matched to 2BR2 B:156-248
complexed with cl, na, rp5, u5p
region x:156-248
[146275]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region b:156-248
[146279]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region d:156-248
[146283]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region f:156-248
[146287]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region h:156-248
[146291]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region j:156-248
[146295]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region l:156-248
[146299]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region n:156-248
[146303]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region p:156-248
[146307]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region r:156-248
[146311]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region t:156-248
[146315]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region v:156-247
[146319]
2c38
automatically matched to 2BR2 B:156-248
complexed with amp, cl
region x:156-248
[146323]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region b:156-248
[146327]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region d:156-248
[146331]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region f:156-248
[146335]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region j:156-248
[146341]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region l:156-248
[146345]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region n:156-248
[146349]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region p:156-248
[146353]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region r:156-248
[146357]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region t:156-248
[146361]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region v:156-247
[146365]
2c39
automatically matched to 2BR2 B:156-248
complexed with adp
region x:156-248
[146369]
Archaeoglobus fulgidus
[TaxId: 2234]
[160592] (6)
SQ
O29757
154-252
2ba0
region d:154-252
[146106]
2ba0
automatically matched to 2BA0 D:154-252
region e:154-252
[146108]
2ba0
automatically matched to 2BA0 D:154-252
region f:154-252
[146110]
2ba1
automatically matched to 2BA0 D:154-252
complexed with zn
region d:154-252
[146118]
2ba1
automatically matched to 2BA0 D:154-252
complexed with zn
region e:154-252
[146120]
2ba1
automatically matched to 2BA0 D:154-252
complexed with zn
region f:154-252
[146122]
Exosome complex exonuclease RRP41 [160593]
Human (Homo sapiens)
[TaxId: 9606]
[160594] (1)
SQ
Q9NPD3
152-241
2nn6
mutant
region b:151-240
[148298]
Exosome complex exonuclease RRP46 [160595]
Human (Homo sapiens)
[TaxId: 9606]
[160596] (1)
SQ
Q9NQT4
147-235
2nn6
mutant
region d:147-235
[148302]
Exosome complex exonuclease 2, ECX2 [160597]
Archaeoglobus fulgidus
[TaxId: 2234]
[160598] (6)
SQ
O29756
179-257
2ba0
region g:179-257
[146112]
2ba0
automatically matched to 2BA0 G:179-257
region h:179-257
[146114]
2ba0
automatically matched to 2BA0 G:179-257
region i:179-257
[146116]
2ba1
automatically matched to 2BA0 G:179-257
complexed with zn
region g:179-257
[146124]
2ba1
automatically matched to 2BA0 G:179-257
complexed with zn
region h:179-257
[146126]
2ba1
automatically matched to 2BA0 G:179-257
complexed with zn
region i:179-257
[146128]
Sulfolobus solfataricus
[TaxId: 2287]
[160599] (51)
SQ
Q9UXC0
192-275
2je6
complexed with 1pe, cl, peg; mutant
region a:192-275
[147992]
2jea
automatically matched to 2JE6 A:192-275
complexed with 1pe; mutant
region a:192-275
[148009]
2jeb
automatically matched to 2JE6 A:192-275
complexed with 1pe, cl, mn; mutant
region a:192-275
[148016]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region a:192-275
[146166]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region c:192-275
[146170]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region e:192-275
[146174]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region g:192-275
[146178]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region i:192-275
[146182]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region k:192-275
[146186]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region m:192-275
[146190]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region o:192-275
[146194]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region q:192-275
[146198]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region s:192-275
[146202]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region u:192-275
[146206]
2br2
automatically matched to 2JE6 A:192-275
complexed with cl
region w:192-275
[146210]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region a:192-275
[146229]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region c:192-275
[146233]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region e:192-275
[146237]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region g:192-275
[146241]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region i:192-275
[146245]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region k:192-275
[146249]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region m:192-275
[146253]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region o:192-275
[146257]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region q:192-275
[146261]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region s:192-275
[146265]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region u:192-275
[146269]
2c37
automatically matched to 2JE6 A:192-275
complexed with cl, na, rp5, u5p
region w:192-275
[146273]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region a:192-275
[146277]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region c:192-275
[146281]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region e:192-275
[146285]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region g:192-275
[146289]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region i:192-275
[146293]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region k:192-275
[146297]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region m:192-275
[146301]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region o:192-275
[146305]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region q:192-275
[146309]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region s:192-275
[146313]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region u:192-274
[146317]
2c38
automatically matched to 2JE6 A:192-275
complexed with amp, cl
region w:192-275
[146321]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region a:192-275
[146325]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region c:192-275
[146329]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region e:192-275
[146333]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region g:192-275
[146337]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region i:192-275
[146339]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region k:192-275
[146343]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region m:192-275
[146347]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region o:192-275
[146351]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region q:192-275
[146355]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region s:192-274
[146359]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region u:192-274
[146363]
2c39
automatically matched to 2JE6 A:192-275
complexed with adp
region w:192-275
[146367]
Exosome complex exonuclease MTR3 [160600]
Human (Homo sapiens)
[TaxId: 9606]
[160601] (1)
SQ
Q5RKV6
176-270
2nn6
mutant
region f:176-270
[148306]
Exosome complex exonuclease RRP43 [160602]
Human (Homo sapiens)
[TaxId: 9606]
[160603] (1)
SQ
Q96B26
188-276
2nn6
mutant
region c:188-276
[148300]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk