Structural Classification of Proteins
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Fold: TrkA C-terminal domain-like

beta-X-beta(2)-X-beta-alpha; pseudo barrel capped by helix at one end; topological similarity to the HPr-like fold

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: TrkA C-terminal domain-like [116725]
    beta-X-beta(2)-X-beta-alpha; pseudo barrel capped by helix at one end; topological similarity to the HPr-like fold

Superfamilies:

  1. TrkA C-terminal domain-like [116726] (1)
    link to SUPERFAMILY database - Superfamily
    1. TrkA C-terminal domain-like [116727] (2)
      Pfam 02080
      1. Potassium channel-related protein MthK, C-terminal domain [116728]
        1. Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262] [116729] (9)
          1. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region a:245-336 [134346] picpiclink
          2. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region b:245-336 [134348] picpiclink
          3. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region c:245-336 [134350] picpiclink
          4. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region d:245-336 [134352] picpiclink
          5. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region e:245-336 [134354] picpiclink
          6. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region f:245-336 [134356] picpiclink
          7. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region g:245-336 [134358] picpiclink
          8. 2fy8 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1lnqa4
            mutant
            1. region h:245-336 [134360] picpiclink
          9. 1lnq picpicxrefxref
            complexed with ca
            1. region a:245-336 [111577] picpiclink
            2. region b:245-336 [111579] picpiclink
            3. region c:245-336 [111581] picpiclink
            4. region d:245-336 [111583] picpiclink
            5. region e:245-336 [111585] picpiclink
            6. region f:245-336 [111587] picpiclink
            7. region g:245-336 [111589] picpiclink
            8. region h:245-336 [111591] picpiclink
      2. Hypothetical protein PH0236, C-terminal domain [143625]
        1. Pyrococcus horikoshii [TaxId: 53953] [143626] (4)
          SQ O57975 108-201
          1. 1vct picpicxref
            complexed with cl, edo, na
            1. region a:108-201 [119987] picpiclink
          2. 2bko picpicxref
            automatically matched to 1VCT A:108-201
            complexed with ca, cl
            1. region a:108-199 [128703] picpiclink
          3. 2bkp picpicxref
            automatically matched to 1VCT A:108-201
            complexed with k
            1. region a:108-201 [128705] picpiclink
          4. 2bkn picpicxref
            automatically matched to 1VCT A:108-201
            complexed with cs
            1. region a:108-201 [128701] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk