Structural Classification of Proteins
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Family: PBP transglycosylase domain-like

Pfam 00912; lacking the characteristic beta-sheet; otherwise has a similar fold to the Family 19 glycosidase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Lysozyme-like [53954]
    common alpha+beta motif for the active site region
  4. Superfamily: Lysozyme-like [53955]
    link to SUPERFAMILY database - Superfamily
  5. Family: PBP transglycosylase domain-like [159832]
    Pfam 00912; lacking the characteristic beta-sheet; otherwise has a similar fold to the Family 19 glycosidase

Protein Domains:

  1. Penicillin-binding protein 1a, PBP1a [159833]
    1. Aquifex aeolicus [TaxId: 63363] [159834] (2)
      SQ O66874 57-243
      1. 2oqo picpic
        Transglycosylase domain only
        complexed with cps, epe
        1. region a:57-243 [148996] picpiclink
      2. 3d3h picpic
        automatically matched to 2OQO A:57-243
        complexed with m4o
        1. region a:61-243 [157284] picpiclink
  2. Penicillin-binding protein 2, PBP2 [159835]
    1. Staphylococcus aureus [TaxId: 1280] [159836] (7)
      SQ Q2YY56 67-292
      1. 2olu picpicxref
        automatically matched to 2OLV A:67-292
        complexed with edo
        1. region a:68-292 [148819] picpiclink
      2. 2olv picpicxrefxref
        complexed with m0e
        1. region a:67-292 [148821] picpiclink
      3. 2olv picpicxrefxref
        automatically matched to 2OLV A:67-292
        complexed with m0e
        1. region b:67-292 [148823] picpiclink
      4. 3dwk picpicxrefxrefxrefxref
        automatically matched to 2OLV A:67-292
        complexed with lda, so4
        1. region a:71-290 [157913] picpiclink
      5. 3dwk picpicxrefxrefxrefxref
        automatically matched to 2OLV A:67-292
        complexed with lda, so4
        1. region b:71-292 [157915] picpiclink
      6. 3dwk picpicxrefxrefxrefxref
        automatically matched to 2OLV A:67-292
        complexed with lda, so4
        1. region c:70-292 [157917] picpiclink
      7. 3dwk picpicxrefxrefxrefxref
        automatically matched to 2OLV A:67-292
        complexed with lda, so4
        1. region d:73-292 [157919] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk