Fold: RNA bacteriophage capsid protein

6-standed beta-sheet followed with 2 helices; meander

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: RNA bacteriophage capsid protein [55404]
   6-standed beta-sheet followed with 2 helices; meander

Superfamilies:

1. RNA bacteriophage capsid protein [55405] (1)
   uperfamily
   1. RNA bacteriophage capsid protein [55406] (5)
      1. MS2 virus coat protein [55407]
         1. Bacteriophage MS2 [TaxId: 12022] [55408] (48)
            SQ P03612
            1. 2bu1
               automatically matched to d1dzsa_
               complexed with 5bu
               1. region a:1-129 [129164]
            2. 2bu1
               automatically matched to d1dzsa_
               complexed with 5bu
               1. region b:1-129 [129165]
            3. 2bu1
               automatically matched to d1dzsa_
               complexed with 5bu
               1. region c:1-129 [129166]
            4. 2c4q
               automatically matched to d1dzsa_
               complexed with pyo; mutant
               1. region a:1-129 [129842]
            5. 2c4q
               automatically matched to d1dzsa_
               complexed with pyo; mutant
               1. region b:1-129 [129843]
            6. 2c4q
               automatically matched to d1dzsa_
               complexed with pyo; mutant
               1. region c:1-129 [129844]
            7. 2izn
               automatically matched to d1dzsa_
               1. region a:1-129 [137823]
            8. 2izn
               automatically matched to d1dzsa_
               1. region b:1-129 [137824]
            9. 2izn
               automatically matched to d1dzsa_
               1. region c:1-129 [137825]
            10. 2c4z
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region a:1-129 [129867]
            11. 2c4z
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region b:1-129 [129868]
            12. 2c4z
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region c:1-129 [129869]
            13. 2c51
                automatically matched to d1dzsa_
                mutant
                1. region a:1-129 [129873]
            14. 2c51
                automatically matched to d1dzsa_
                mutant
                1. region b:1-129 [129874]
            15. 2c51
                automatically matched to d1dzsa_
                mutant
                1. region c:1-129 [129875]
            16. 2c4y
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region a:1-129 [129864]
            17. 2c4y
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region b:1-129 [129865]
            18. 2c4y
                automatically matched to d1dzsa_
                complexed with sur; mutant
                1. region c:1-129 [129866]
            19. 1zdh
                protein/RNA complex
                1. chain a [40043]
                2. chain b [40044]
                3. chain c [40045]
            20. 1mst
                mutant
                1. chain a [40055]
                2. chain b [40056]
                3. chain c [40057]
            21. 1msc
                mutant
                1. chain a [40039]
            22. 1zdi
                protein/RNA complex
                1. chain a [40052]
                2. chain b [40053]
                3. chain c [40054]
            23. 1bms
                mutant
                1. chain a [40082]
                2. chain b [40083]
                3. chain c [40084]
            24. 1zdj
                protein/RNA complex
                1. chain a [40064]
                2. chain b [40065]
                3. chain c [40066]
            25. 1aq3
                protein/RNA complex; mutant
                1. chain a [40079]
                2. chain b [40080]
                3. chain c [40081]
            26. 2c50
                automatically matched to d1dzsa_
                mutant
                1. region a:1-129 [129870]
            27. 2c50
                automatically matched to d1dzsa_
                mutant
                1. region b:1-129 [129871]
            28. 2c50
                automatically matched to d1dzsa_
                mutant
                1. region c:1-129 [129872]
            29. 2iz9
                automatically matched to d1dzsa_
                complexed with one
                1. region a:1-129 [137820]
            30. 2iz9
                automatically matched to d1dzsa_
                complexed with one
                1. region b:1-129 [137821]
            31. 2iz9
                automatically matched to d1dzsa_
                complexed with one
                1. region c:1-129 [137822]
            32. 1mvb
                mutant
                1. chain a [40070]
                2. chain b [40071]
                3. chain c [40072]
            33. 2ms2
                1. chain a [40049]
                2. chain b [40050]
                3. chain c [40051]
            34. 1mva
                mutant
                1. chain a [40088]
                2. chain b [40089]
                3. chain c [40090]
            35. 5msf
                protein/RNA complex
                1. chain a [40058]
                2. chain b [40059]
                3. chain c [40060]
            36. 6msf
                protein/RNA complex
                1. chain a [40067]
                2. chain b [40068]
                3. chain c [40069]
            37. 1zdk
                protein/RNA complex
                1. chain a [40085]
                2. chain b [40086]
                3. chain c [40087]
            38. 1aq4
                protein/RNA complex; mutant
                1. chain a [40091]
                2. chain b [40092]
                3. chain c [40093]
            39. 1u1y
                complexed with 2pr
                1. chain a [112965]
                2. chain b [112966]
                3. chain c [112967]
            40. 2izm
                automatically matched to d1aq4a_
                1. region a:1-129 [147842]
            41. 2izm
                automatically matched to d1aq4a_
                1. region b:1-129 [147843]
            42. 2izm
                automatically matched to d1aq4a_
                1. region c:1-129 [147844]
            43. 7msf
                protein/RNA complex
                1. chain a [40061]
                2. chain b [40062]
                3. chain c [40063]
            44. 2iz8
                automatically matched to d1dzsa_
                1. region a:1-129 [137817]
            45. 2iz8
                automatically matched to d1dzsa_
                1. region b:1-129 [137818]
            46. 2iz8
                automatically matched to d1dzsa_
                1. region c:1-129 [137819]
            47. 2vtu
                automatically matched to d1aq4a_
                1. region j:130-257 [153542]
            48. 2vtu
                automatically matched to d1aq4a_
                1. region l:130-257 [153543]
      2. GA coat protein [55409]
         1. Bacteriophage GA [TaxId: 12018] [55410] (2)
            1. 1una
               1. chain a [40094]
               2. chain b [40095]
            2. 1gav
               contains 9 more identical chains denoted "a b c d e f g h i"
               1. chain a [40096]
               2. chain b [40097]
               3. chain c [40098]
               4. chain d [40099]
               5. chain e [40100]
               6. chain f [40101]
               7. chain g [40102]
               8. chain h [40103]
               9. chain i [40104]
               10. chain j [40105]
               11. chain k [40106]
               12. chain l [40107]
               13. chain m [40108]
               14. chain n [40109]
               15. chain o [40110]
               16. chain p [40111]
               17. chain q [40112]
               18. chain r [40113]
               19. chain s [40114]
               20. chain t [40115]
               21. chain u [40116]
               22. chain v [40117]
               23. chain w [40118]
               24. chain x [40119]
               25. chain y [40120]
               26. chain z [40121]
               27. chain 1 [40122]
               28. chain 2 [40123]
               29. chain 3 [40124]
               30. chain 4 [40125]
               31. chain 5 [40126]
               32. chain 6 [40127]
               33. chain 7 [40128]
               34. chain 8 [40129]
               35. chain 9 [40130]
               36. chain 0 [40131]
      3. fr coat protein [55411]
         1. Bacteriophage FR [TaxId: 12017] [55412] (2)
            1. 1fr5
               mutant
               1. chain a [40135]
               2. chain b [40136]
               3. chain c [40137]
            2. 1frs
               1. chain a [40132]
               2. chain b [40133]
               3. chain c [40134]
      4. Qbeta coat protein [55413]
         1. Bacteriophage Qbeta [TaxId: 39803] [55414] (1)
            1. 1qbe
               1. chain a [40138]
               2. chain b [40139]
               3. chain c [40140]
      5. PP7 coat protein [55415]
         1. Bacteriophage PP7 [TaxId: 12023] [55416] (1)
            1. 1dwn
               1. chain a [40141]
               2. chain b [40142]
               3. chain c [40143]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk