Structural Classification of Proteins
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Fold: YjbQ-like

beta(2)-alpha-beta(2)-alpha(2)-beta(3); contains a beta-sandwich: 7 strands in 2 sheets; trimerizes with orthogonally packed beta-sheets

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: YjbQ-like [111037]
    beta(2)-alpha-beta(2)-alpha(2)-beta(3); contains a beta-sandwich: 7 strands in 2 sheets; trimerizes with orthogonally packed beta-sheets

Superfamilies:

  1. YjbQ-like [111038] (1)
    link to SUPERFAMILY database - Superfamily
    1. YjbQ-like [111039] (4)
      Pfam 01894
      1. B.subtilis YugU ortolog CAC0907 [111040]
        1. Clostridium acetobutylicum [TaxId: 1488] [111041] (2)
          SQ Q97KL0
          1. 1vmh picpic
            Structural genomics target
            complexed with na
            1. chain a [113677] picpiclink
          2. 1xbf picpic
            Structural genomics target
            complexed with so4
            1. chain a [109538] picpiclink
            2. chain b [109539] picpiclink
            3. chain c [109540] picpiclink
      2. Hypothetical protein BH3498 [118032]
        1. Bacillus halodurans [TaxId: 86665] [118033] (1)
          SQ Q9K772
          1. 1vmf picpic
            Structural genomics target
            complexed with act, edo, epe, na
            1. chain a [113673] picpiclink
            2. chain b [113674] picpiclink
            3. chain c [113675] picpiclink
      3. Hypothetical protein TM0723 [118034]
        1. Thermotoga maritima [TaxId: 2336] [118035] (1)
          SQ Q9WZI2
          1. 1vmj picpic
            Structural genomics target
            complexed with na, so4
            1. chain a [113679] picpiclink
      4. Hypothetical protein SSO2532 [118036]
        1. Sulfolobus solfataricus [TaxId: 2287] [118037] (1)
          SQ Q97VS8
          1. 1vph picpic
            Structural genomics target
            complexed with cl, edo, k, po4
            1. chain a [113955] picpiclink
            2. chain b [113956] picpiclink
            3. chain c [113957] picpiclink
            4. chain d [113958] picpiclink
            5. chain e [113959] picpiclink
            6. chain f [113960] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk