Structural Classification of Proteins

Superfamily: YjgF-like

: forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Bacillus chorismate mutase-like [55297]
core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
Superfamily: YjgF-like [55298]
forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
uperfamily

Families:

YjgF/L-PSP [55299] (15)
some members possess an endoribonuclease activity inhibiting mRNA translation
1. Conserved 'hypothetical' protein YjgF [55300]
  1. Escherichia coli [TaxId: 562] [55301] (1)
  2. Haemophilus influenzae [TaxId: 727] [82719] (1)
    YjgF homologue HI0719
2. Hypothetical protein YjgH [103075]
  1. Escherichia coli [TaxId: 562] [103076] (1)
3. Purine regulatory protein YabJ [55302]
  1. Bacillus subtilis [TaxId: 1423] [55303] (1)
  2. Clostridium thermocellum [TaxId: 1515] [118024] (1)
    SQ Q4CI45
4. Highdosage growth inhibitor YER057cp (YEO7_YEAST) [64319]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64320] (1)
5. 14.5 kda translational inhibitor protein, L-PSP [89979]
  mammalian tumor associated antigen UK114
  1. Human (Homo sapiens) [TaxId: 9606] [89980] (1)
  2. Goat (Capra hircus) [TaxId: 9925] [103077] (1)
  3. Rat (Rattus norvegicus) [TaxId: 10116] [103078] (1)
    Perchloric acid soluble protein
6. Hypothetical protein ST0811 [143521]
  1. Sulfolobus tokodaii [TaxId: 111955] [143522] (2)
    SQ Q973T6 1-124
7. Putative endonuclease APE1501 [143523]
  1. Aeropyrum pernix [TaxId: 56636] [143524] (1)
    SQ Q9YBU8 4-119
8. Putative protein synthesis inhibitor TM0215 [143525]
  1. Thermotoga maritima [TaxId: 2336] [143526] (2)
    SQ Q9WY58 2-127
9. Hypothetical protein SPy2060 [143527]
  1. Streptococcus pyogenes [TaxId: 1314] [143528] (12)
    SQ Q99XS4 3-122
10. Putative translation intiation inhibitor TTHA0137 [143529]
  1. Thermus thermophilus [TaxId: 274] [143530] (13)
    SQ Q5SM06 1-124
11. Hypothetical protein SO1960 [160498]
  1. Shewanella oneidensis [TaxId: 70863] [160499] (3)
    SQ Q8EFL1 2-153
Chorismate mutase [55304] (3)
1. Chorismate mutase [55305]
  1. Bacillus subtilis [TaxId: 1423] [55306] (6)
  2. Thermus thermophilus [TaxId: 274] [89981] (3)
  3. Clostridium thermocellum [TaxId: 1515] [118025] (1)
    SQ Q5KXU6 5-114 # 53% sequence identity