Structural Classification of Proteins
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Fold: Hedgehog/DD-peptidase

alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Hedgehog/DD-peptidase [55165]
    alpha-beta(2)-alpha-beta(2); 2 layers: alpha/beta

Superfamilies:

  1. Hedgehog/DD-peptidase [55166] (5)
    zinc-binding motif
    link to SUPERFAMILY database - Superfamily
    1. Muramoyl-pentapeptide carboxypeptidase [55167] (1)
      1. Zn2+ DD-carboxypeptidase C-terminal catalytic domain [55168]
        1. Streptomyces albus G [TaxId: 1962] [55169] (1) picpic
    2. MepA-like [111019] (1)
      1. D-alanyl-D-alanine-endopeptidase MepA [111020]
        1. Escherichia coli [TaxId: 562] [111021] (2) picpic
          SQ P14007
    3. VanX-like [111022] (1)
      Pfam 01427
      1. D-Ala-D-Ala dipeptidase VanX [111023]
        1. Enterococcus faecium [TaxId: 1352] [111024] (1) picpic
          SQ Q06241
    4. Hedgehog (development protein), N-terminal signaling domain [55170] (2)
      1. Sonic hedgehog [55171]
        1. Mouse (Mus musculus) [TaxId: 10090] [55172] (3) picpic
      2. Hedgehog [143496]
        lacks the conserved metal ion-binding site
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143497] (4) picpic
          SQ Q02936 50-198
    5. VanY-like [160436] (1)
      Pfam 02557
      1. L-alanyl-D-glutamate peptidase Ply [160437]
        1. Listeria phage A500 [TaxId: 40522] [160438] (3) picpic
          SQ Q37979 1-148
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk