Structural Classification of Proteins
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Fold: DNA-binding domain

beta(3)-alpha; 2 layers: alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: DNA-binding domain [54170]
    beta(3)-alpha; 2 layers: alpha/beta

Superfamilies:

  1. DNA-binding domain [54171] (4)
    link to SUPERFAMILY database - Superfamily
    1. DNA-binding domain from tn916 integrase [54172] (1)
      1. DNA-binding domain from tn916 integrase [54173]
        1. Enterococcus faecalis [TaxId: 1351] [54174] (4) picpic
    2. lambda integrase N-terminal domain [75344] (1)
      1. lambda integrase N-terminal domain [75345]
        1. Bacteriophage lambda [TaxId: 10710] [75346] (7) picpic
    3. GCC-box binding domain [54175] (1)
      1. GCC-box binding domain [54176]
        1. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [54177] (3) picpic
    4. Methyl-CpG-binding domain, MBD [54178] (3)
      1. Methyl-CpG-binding protein 2, MECP2 [54179]
        1. Human (Homo sapiens) [TaxId: 9606] [54180] (1) picpic
        2. Chicken (Gallus gallus) [TaxId: 9031] [102734] (1) picpic
      2. Methylation-dependent transcriptional repressor MBD1/PCM1 [54181]
        1. Human (Homo sapiens) [TaxId: 9606] [54182] (2) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk