Structural Classification of Proteins
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Family: THUMP domain

Pfam 02926

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: THUMP domain [143436]
    contains mixed 8-stranded beta-sheet, folded into a half-barrel and covered with 4 helices on the outside; order 32148756; strands 5, 6 and 7 are parallel
  4. Superfamily: THUMP domain-like [143437]
    predicted RNA-binding function
    link to SUPERFAMILY database - Superfamily
  5. Family: THUMP domain [143438]
    Pfam 02926

Protein Domains:

  1. Thiamine biosynthesis protein ThiI, N-terminal domain [143439]
    1. Bacillus anthracis [TaxId: 1392] [143440] (1)
      SQ Q81KU0 3-173
      1. 2c5s picpicxref
        complexed with amp
        1. region a:3-173 [129951] picpiclink
  2. Hypothetical protein PH1313, N-terminal domain [143441]
    1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [143442] (2)
      SQ O59053 1-175
      1. 1vbk picpicxrefxref
        complexed with mrd
        1. region a:1-175 [119958] picpiclink
      2. 1vbk picpicxrefxref
        automatically matched to 1VBK A:1-175
        complexed with mrd
        1. region b:1-175 [119960] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk