Structural Classification of Proteins
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Family: Aminomethyltransferase folate-binding domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Folate-binding domain [103024]
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
  4. Superfamily: Folate-binding domain [103025]
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
    link to SUPERFAMILY database - Superfamily
  5. Family: Aminomethyltransferase folate-binding domain [103026]

Protein Domains:

  1. N,N-dimethylglycine oxidase domain 3 [103027]
    1. Arthrobacter globiformis [TaxId: 1665] [103028] (3)
      1. 1pj5 picpicxrefxrefxref
        complexed with act, fad, na
        1. region a:428-742 [94745] picpiclink
      2. 1pj6 picpicxrefxrefxref
        complexed with fad, fol, na
        1. region a:428-742 [94749] picpiclink
      3. 1pj7 picpicxrefxrefxref
        complexed with fad, fon, na
        1. region a:428-742 [94753] picpiclink
  2. Hypothetical protein YgfZ, N-terminal domain [103029]
    1. Escherichia coli [TaxId: 562] [103030] (2)
      SQ P39179
      1. 1vly picpicxref
        Structural genomics target
        complexed with act, ca, cl, edo
        1. region a:3-243 [108872] picpiclink
      2. 1nrk picpicxref
        structural genomics
        complexed with so4
        1. region a:1-243 [92090] picpiclink
  3. Glycine cleavage system T protein, GcvT [111012]
    1. Thermotoga maritima [TaxId: 2336] [111013] (4)
      SQ Q9WY54
      1. 1wos picpicxref
        1. region a:1-278 [109469] picpiclink
      2. 1wor picpicxref
        complexed with red
        1. region a:1-278 [109467] picpiclink
      3. 1wop picpicxref
        complexed with fon
        1. region a:1-278 [109461] picpiclink
      4. 1woo picpicxref
        complexed with thl
        1. region a:1-278 [109459] picpiclink
    2. Escherichia coli [TaxId: 562] [111014] (1)
      SQ P27248
      1. 1vlo picpicxref
        Structural genomics target
        mutant
        1. region a:4-277 [108839] picpiclink
    3. Pyrococcus horikoshii [TaxId: 53953] [117996] (1)
      SQ O58888
      1. 1v5v picpicxref
        complexed with gol, peg
        1. region a:3-312 [113540] picpiclink
        2. region b:3-312 [113542] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk