Structural Classification of Proteins
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Family: Pseudouridine synthase RsuA/RluD

contains N-terminal alpha-L RNA-binding motif

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Pseudouridine synthase [100877]
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. Superfamily: Pseudouridine synthase [55120]
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
    link to SUPERFAMILY database - Superfamily
  5. Family: Pseudouridine synthase RsuA/RluD [75459]
    contains N-terminal alpha-L RNA-binding motif

Protein Domains:

  1. Ribosomal small subunit pseudouridine 516 synthase RsuA [75460]
    1. Escherichia coli [TaxId: 562] [75461] (3)
      1. 1ksk picpicxref
        complexed with mse, ura
        1. region a:60-231 [90389] picpiclink
      2. 1ksl picpicxref
        complexed with mse, ura
        1. region a:60-231 [90390] picpiclink
      3. 1ksv picpicxref
        complexed with mse, u
        1. region a:60-231 [90391] picpiclink
    2. Haemophilus influenzae [TaxId: 727] [103018] (1)
      1. 1vio picpicxref
        structural genomics
        complexed with bu1
        1. region a:58-231 [100762] picpiclink
        2. region b:58-231 [100764] picpiclink
  2. Ribosomal large subunit pseudouridine synthase D, RluD [103019]
    1. Escherichia coli [TaxId: 562] [103020] (3)
      SQ P33643
      1. 1v9f picpic
        complexed with po4
        1. chain a [108448] picpiclink
      2. 1prz picpic
        mutant
        1. chain a [95064] picpiclink
      3. 1qyu picpic
        1. chain a [96604] picpiclink
  3. Ribosomal large subunit pseudouridine synthase C, RluC [111010]
    1. Escherichia coli [TaxId: 562] [111011] (1)
      SQ P23851
      1. 1v9k picpic
        complexed with so4; mutant
        1. chain a [108449] picpiclink
        2. chain b [108450] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk