Structural Classification of Proteins
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Family: Pseudouridine synthase II TruB

contains C-terminal PUA domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Pseudouridine synthase [100877]
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. Superfamily: Pseudouridine synthase [55120]
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
    link to SUPERFAMILY database - Superfamily
  5. Family: Pseudouridine synthase II TruB [69746]
    contains C-terminal PUA domain

Protein Domains:

  1. Pseudouridine synthase II TruB [69747]
    1. Escherichia coli [TaxId: 562] [69748] (3)
      1. 1k8w picpicxref
        complexed with fhu, so4; mutant
        1. region a:9-250 [90388] picpiclink
      2. 1r3f picpicxref
        1. region a:8-250 [96910] picpiclink
      3. 1zl3 picpicxref
        automatically matched to d1r3fa2
        complexed with so4, ud5; mutant
        1. region a:10-250 [125236] picpiclink
    2. Thermotoga maritima [TaxId: 2336] [103016] (8)
      1. 1r3e picpicxref
        complexed with fhu
        1. region a:10-237 [96908] picpiclink
      2. 2ab4 picpicxref
        complexed with fhu, zn; mutant
        1. region a:1-228 [126506] picpiclink
      3. 1ze1 picpicxrefxrefxrefxref
        automatically matched to d1r3ea2
        complexed with mg
        1. region a:1-228 [124963] picpiclink
      4. 1ze1 picpicxrefxrefxrefxref
        automatically matched to d1r3ea2
        complexed with mg
        1. region b:1-228 [124965] picpiclink
      5. 1ze1 picpicxrefxrefxrefxref
        automatically matched to d1r3ea2
        complexed with mg
        1. region c:1-228 [124967] picpiclink
      6. 1ze1 picpicxrefxrefxrefxref
        automatically matched to d1r3ea2
        complexed with mg
        1. region d:1-228 [124969] picpiclink
      7. 1ze2 picpicxrefxref
        automatically matched to d1r3ea2
        complexed with fhu
        1. region a:1-228 [124971] picpiclink
      8. 1ze2 picpicxrefxref
        automatically matched to d1r3ea2
        complexed with fhu
        1. region b:1-228 [124973] picpiclink
    3. Mycobacterium tuberculosis [TaxId: 1773] [103017] (1)
      1. 1sgv picpicxref
        1. region a:3-235 [98859] picpiclink
        2. region b:1-235 [98861] picpiclink
    4. Archaeon Pyrococcus furiosus [TaxId: 2261] [143434] (4)
      SQ Q7LWY0 5-249
      1. 2ey4 picpicxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region a:8-252 [132579] picpiclink
      2. 2ey4 picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2EY4 A:8-252
        complexed with zn
        1. region b:11-252 [132581] picpiclink
      3. 2hvy picpicxrefxrefxrefxref
        automatically matched to 2EY4 A:8-252
        complexed with atp, zn; mutant
        1. region a:11-252 [136818] picpiclink
      4. 2rfk picpicxrefxrefxref
        automatically matched to d2ey4a2
        complexed with zn; mutant
        1. region a:8-252 [151997] picpiclink
    5. Archaeon Methanococcus jannaschii [TaxId: 2190] [143435] (1)
      SQ Q57612 17-246
      1. 2apo picpicxrefxref
        complexed with k, zn
        1. region a:17-246 [127134] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk