Structural Classification of Proteins
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Superfamily: EF-G C-terminal domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: EF-G C-terminal domain-like [54980]
    link to SUPERFAMILY database - Superfamily

Families:

  1. EF-G/eEF-2 domains III and V [54981] (3)
    domain III structure is lacking some of the superfamily characters and is often disordered in crystals
    1. Elongation factor G (EF-G) [54982]
      domain III is seen in 1FNM but disordered in the most of other PDB entries
      1. Thermus thermophilus [TaxId: 274] [54983] (12) picpic
      2. Thermus thermophilus, EF-G-2 [TaxId: 274] [143371] (4) picpic
        SQ Q5SI76 371-447! SQ Q5SI76 563-658
        TTHA1498
    2. Elongation factor 2 (eEF-2) [82677]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82678] (41) picpic
        SQ P32324
  2. YigZ C-terminal domain-like [102991] (2)
    similar to EF-G domain V; N-terminal domain shares structural similarity with the EF-G domain IV
    1. Hypothetical protein YigZ, C-terminal domain [102992]
      1. Escherichia coli [TaxId: 562] [102993] (1) picpic
    2. Hypothetical protein TTHA1053, C-terminal domain [143372]
      1. Thermus thermophilus [TaxId: 274] [143373] (1) picpic
        SQ Q5SJF5 125-191
  3. Hypothetical protein AF0491, C-terminal domain [110976] (1)
    1. Hypothetical protein AF0491, C-terminal domain [110977]
      1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [110978] (2) picpic
        SQ O29759
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk