Structural Classification of Proteins
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Family: Single 4Fe-4S cluster ferredoxin

contains only one 4Fe-4S cluster

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: 4Fe-4S ferredoxins [54862]
    link to SUPERFAMILY database - Superfamily
  5. Family: Single 4Fe-4S cluster ferredoxin [54877]
    contains only one 4Fe-4S cluster

Protein Domains:

  1. Ferredoxin A [54878]
    1. Thermotoga maritima [TaxId: 2336] [54879] (2)
      1. 1vjw picpic
        complexed with fs4
        1. chain a [38991] picpiclink
      2. 1rof picpic
        complexed with fs4
        1. chain a [38992] picpiclink
  2. Ferredoxin I [54880]
    1. Sulfate-reducing bacteria (Desulfovibrio africanus) [TaxId: 873] [54881] (3)
      1. 1fxr picpic
        complexed with fs4, so4
        1. chain a [38993] picpiclink
        2. chain b [38994] picpiclink
      2. 1dfd picpic
        complexed with fs4
        1. chain a [38995] picpiclink
      3. 1dax picpic
        complexed with fs4
        1. chain a [38996] picpiclink
    2. Desulfovibrio gigas [TaxId: 879] [54865] (2)
      1. 1fxd picpic
        complexed with cs, f3s
        1. chain a [38941] picpiclink
      2. 1f2g picpic
        complexed with fs3
        1. chain a [38942] picpiclink
  3. Ferredoxin [54882]
    1. Bacillus thermoproteolyticus [TaxId: 1427] [54883] (6)
      1. 1iqz picpic
        complexed with fs4, sul
        1. chain a [66281] picpiclink
      2. 1ir0 picpic
        complexed with fs4, sul
        1. chain a [66282] picpiclink
      3. 1wtf picpic
        automatically matched to d1iqza_
        complexed with coa, f3s, so4
        1. region a:1-81 [121258] picpiclink
      4. 1wtf picpic
        automatically matched to d1iqza_
        complexed with coa, f3s, so4
        1. region b:1-81 [121259] picpiclink
      5. 1wtf picpic
        automatically matched to d1iqza_
        complexed with coa, f3s, so4
        1. region c:1-81 [121260] picpiclink
      6. 1wtf picpic
        automatically matched to d1iqza_
        complexed with coa, f3s, so4
        1. region d:1-81 [121261] picpiclink
  4. Fe3S4-ferredoxin PF1909 [110946]
    1. Pyrococcus furiosus [TaxId: 2261] [110947] (2)
      SQ P29603
      1. 1sj1 picpic
        complexed with f3s, nco
        1. chain a [105595] picpiclink
        2. chain b [105596] picpiclink
      2. 1siz picpic
        complexed with 3co, f3s
        1. chain a [105593] picpiclink
        2. chain c [105594] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk