Structural Classification of Proteins
home mail help root up expand collapse

Family: Bacterial ribonucleases

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Microbial ribonucleases [53932]
    single helix packs against antiparallel beta-sheet
  4. Superfamily: Microbial ribonucleases [53933]
    link to SUPERFAMILY database - Superfamily
  5. Family: Bacterial ribonucleases [81307]

Protein Domains:

  1. Barnase [81305]
    1. Bacillus amyloliquefaciens [TaxId: 1390] [53945] (60)
      1. 2c4b picpicxrefxref
        automatically matched to d1b3sa_
        complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
        1. region a:3-110 [129801] picpiclink
      2. 2c4b picpicxrefxref
        automatically matched to d1b3sa_
        complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
        1. region b:3-110 [129803] picpiclink
      3. 1a2p picpic
        complexed with zn
        1. chain a [36140] picpiclink
        2. chain b [36141] picpiclink
        3. chain c [36142] picpiclink
      4. 1b20 picpic
        complexed with zn
        1. chain a [36207] picpiclink
        2. chain b [36208] picpiclink
        3. chain c [36209] picpiclink
      5. 1b2x picpic
        complexed with zn
        1. chain a [36210] picpiclink
        2. chain b [36211] picpiclink
        3. chain c [36212] picpiclink
      6. 1b2s picpicxref
        complexed with sul; mutant
        1. chain a [36213] picpiclink
        2. chain b [36214] picpiclink
        3. chain c [36215] picpiclink
      7. 1brn picpic
        1. chain l [36143] picpiclink
        2. chain m [36144] picpiclink
      8. 2f56 picpic
        automatically matched to d1b27a_
        complexed with ure, zn
        1. region a:1-108 [132974] picpiclink
      9. 2f56 picpic
        automatically matched to d1b27a_
        complexed with ure, zn
        1. region b:1-108 [132975] picpiclink
      10. 2f56 picpic
        automatically matched to d1b27a_
        complexed with ure, zn
        1. region c:1-108 [132976] picpiclink
      11. 1x1y picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region a:3-110 [121610] picpiclink
      12. 1x1y picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region b:3-110 [121611] picpiclink
      13. 1x1y picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region c:3-110 [121612] picpiclink
      14. 1bri picpic
        mutant
        1. chain a [36145] picpiclink
        2. chain b [36146] picpiclink
        3. chain c [36147] picpiclink
      15. 1brk picpic
        complexed with zn; mutant
        1. chain a [36148] picpiclink
        2. chain b [36149] picpiclink
        3. chain c [36150] picpiclink
      16. 1brh picpic
        complexed with zn; mutant
        1. chain a [36151] picpiclink
        2. chain b [36152] picpiclink
        3. chain c [36153] picpiclink
      17. 1b2z picpic
        complexed with zn
        1. chain a [36216] picpiclink
        2. chain b [36217] picpiclink
        3. chain c [36218] picpiclink
      18. 2f5m picpic
        automatically matched to d1b27a_
        complexed with brj
        1. region a:1-108 [133001] picpiclink
      19. 2f5m picpic
        automatically matched to d1b27a_
        complexed with brj
        1. region b:1-108 [133002] picpiclink
      20. 2f5m picpic
        automatically matched to d1b27a_
        complexed with brj
        1. region c:1-108 [133003] picpiclink
      21. 1bsc picpic
        mutant
        1. chain a [36154] picpiclink
        2. chain b [36155] picpiclink
        3. chain c [36156] picpiclink
      22. 1bnf picpic
        mutant
        1. chain a [36166] picpiclink
        2. chain b [36167] picpiclink
        3. chain c [36168] picpiclink
      23. 1brs picpicxref
        mutant
        1. chain a [36163] picpiclink
        2. chain b [36164] picpiclink
        3. chain c [36165] picpiclink
      24. 1brj picpic
        complexed with zn; mutant
        1. chain a [36160] picpiclink
        2. chain b [36161] picpiclink
        3. chain c [36162] picpiclink
      25. 1bsb picpic
        mutant
        1. chain a [36157] picpiclink
        2. chain b [36158] picpiclink
        3. chain c [36159] picpiclink
      26. 1bnj picpic
        1. chain a [36172] picpiclink
        2. chain b [36173] picpiclink
        3. chain c [36174] picpiclink
      27. 2f4y picpic
        automatically matched to d1b27a_
        complexed with zn
        1. region a:1-108 [132960] picpiclink
      28. 2f4y picpic
        automatically matched to d1b27a_
        complexed with zn
        1. region b:1-108 [132961] picpiclink
      29. 2f4y picpic
        automatically matched to d1b27a_
        complexed with zn
        1. region c:1-108 [132962] picpiclink
      30. 2f5w picpic
        automatically matched to d1b27a_
        complexed with tou, zn
        1. region a:1-108 [133012] picpiclink
      31. 2f5w picpic
        automatically matched to d1b27a_
        complexed with tou, zn
        1. region b:1-108 [133013] picpiclink
      32. 2f5w picpic
        automatically matched to d1b27a_
        complexed with tou, zn
        1. region c:1-108 [133014] picpiclink
      33. 1bng picpic
        mutant
        1. chain a [36184] picpiclink
        2. chain b [36185] picpiclink
        3. chain c [36186] picpiclink
      34. 1b21 picpic
        complexed with zn
        1. chain a [36219] picpiclink
        2. chain b [36220] picpiclink
        3. chain c [36221] picpiclink
      35. 1bsa picpic
        mutant
        1. chain a [36169] picpiclink
        2. chain b [36170] picpiclink
        3. chain c [36171] picpiclink
      36. 1yvs picpic
        trimeric domain swapped form
        complexed with so4
        1. chain a [36222] picpiclink
      37. 1bns picpic
        mutant
        1. chain a [36178] picpiclink
        2. chain b [36179] picpiclink
        3. chain c [36180] picpiclink
      38. 1bne picpic
        mutant
        1. chain a [36181] picpiclink
        2. chain b [36182] picpiclink
        3. chain c [36183] picpiclink
      39. 1x1w picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region a:3-110 [121604] picpiclink
      40. 1x1w picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region b:1-110 [121605] picpiclink
      41. 1x1w picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region c:2-110 [121606] picpiclink
      42. 1bse picpic
        mutant
        1. chain a [36175] picpiclink
        2. chain b [36176] picpiclink
        3. chain c [36177] picpiclink
      43. 1bao picpic
        complexed with zn; mutant
        1. chain a [36187] picpiclink
        2. chain b [36188] picpiclink
        3. chain c [36189] picpiclink
      44. 1b27 picpicxref
        mutant
        1. chain a [36223] picpiclink
        2. chain b [36224] picpiclink
        3. chain c [36225] picpiclink
      45. 1b2u picpicxref
        mutant
        1. chain a [36226] picpiclink
        2. chain b [36227] picpiclink
        3. chain c [36228] picpiclink
      46. 1x1x picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region a:1-110 [121607] picpiclink
      47. 1x1x picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region b:1-110 [121608] picpiclink
      48. 1x1x picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region c:2-110 [121609] picpiclink
      49. 1bni picpic
        1. chain a [36193] picpiclink
        2. chain b [36194] picpiclink
        3. chain c [36195] picpiclink
      50. 1brg picpic
        complexed with zn; mutant
        1. chain a [36190] picpiclink
        2. chain b [36191] picpiclink
        3. chain c [36192] picpiclink
      51. 1rnb picpic
        complexed with so4
        1. chain a [36196] picpiclink
      52. 1x1u picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region a:1-110 [121598] picpiclink
      53. 1x1u picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region b:1-110 [121599] picpiclink
      54. 1x1u picpicxrefxrefxref
        automatically matched to d1b27a_
        mutant
        1. region c:2-110 [121600] picpiclink
      55. 1ban picpic
        mutant
        1. chain a [36197] picpiclink
        2. chain b [36198] picpiclink
        3. chain c [36199] picpiclink
      56. 1bsd picpic
        mutant
        1. chain a [36200] picpiclink
        2. chain b [36201] picpiclink
        3. chain c [36202] picpiclink
      57. 1bgs picpicxref
        mutant
        1. chain a [36203] picpiclink
        2. chain b [36204] picpiclink
        3. chain c [36205] picpiclink
      58. 1b3s picpicxref
        mutant
        1. chain a [36229] picpiclink
        2. chain b [36230] picpiclink
        3. chain c [36231] picpiclink
      59. 1fw7 picpic
        1. chain a [83262] picpiclink
      60. 1bnr picpic
        1. chain a [36206] picpiclink
  2. Binase [81306]
    1. Bacillus intermedius [TaxId: 1400] [53946] (5)
      1. 1gou picpic
        1. chain a [65429] picpiclink
        2. chain b [65430] picpiclink
      2. 1gov picpic
        complexed with so4
        1. chain a [65431] picpiclink
        2. chain b [65432] picpiclink
      3. 1goy picpic
        complexed with 3gp, so4
        1. chain a [65433] picpiclink
        2. chain b [65434] picpiclink
      4. 2rbi picpic
        mutant
        1. chain a [36232] picpiclink
        2. chain b [36233] picpiclink
      5. 1buj picpic
        1. chain a [36234] picpiclink
  3. RNase Sa [53935]
    1. Streptomyces aureofaciens [TaxId: 1894] [53936] (22)
      SQ P05798
      1. 1lni picpic
        complexed with gol, so4
        1. chain a [74046] picpiclink
        2. chain b [74047] picpiclink
      2. 1t2h picpic
        complexed with sul; mutant
        1. chain a [112217] picpiclink
        2. chain b [112218] picpiclink
      3. 1t2i picpic
        mutant
        1. chain a [112219] picpiclink
      4. 1rge picpic
        complexed with 2gp, so4
        1. chain a [36028] picpiclink
        2. chain b [36029] picpiclink
      5. 1rgg picpic
        complexed with so4
        1. chain a [36030] picpiclink
        2. chain b [36031] picpiclink
      6. 1i8v picpic
        complexed with sul; mutant
        1. chain a [61985] picpiclink
        2. chain b [61986] picpiclink
      7. 1rgh picpic
        complexed with so4
        1. chain a [36032] picpiclink
        2. chain b [36033] picpiclink
      8. 1rgf picpic
        complexed with so4
        1. chain a [36034] picpiclink
        2. chain b [36035] picpiclink
      9. 1i70 picpic
        complexed with sul; mutant
        1. chain a [61862] picpiclink
        2. chain b [61863] picpiclink
      10. 1gmp picpic
        complexed with 2gp, so4
        1. chain a [36036] picpiclink
        2. chain b [36037] picpiclink
      11. 1box picpic
        mutant
        1. chain a [36038] picpiclink
      12. 1ay7 picpicxref
        1. chain a [36041] picpiclink
      13. 1gmq picpic
        complexed with so4
        1. chain a [36039] picpiclink
        2. chain b [36040] picpiclink
      14. 1uci picpic
        complexed with so4; mutant
        1. chain a [99175] picpiclink
        2. chain b [99176] picpiclink
      15. 1gmr picpic
        complexed with 2gp, so4
        1. chain a [36042] picpiclink
        2. chain b [36043] picpiclink
      16. 1uck picpic
        complexed with so4; mutant
        1. chain a [99179] picpiclink
        2. chain b [99180] picpiclink
      17. 1rsn picpic
        complexed with sgp, so4
        1. chain a [36046] picpiclink
        2. chain b [36047] picpiclink
      18. 1ucl picpic
        complexed with so4; mutant
        1. chain a [99181] picpiclink
        2. chain b [99182] picpiclink
      19. 1ucj picpic
        complexed with so4; mutant
        1. chain a [99177] picpiclink
        2. chain b [99178] picpiclink
      20. 2sar picpic
        complexed with gmp, so4
        1. chain a [36044] picpiclink
        2. chain b [36045] picpiclink
      21. 1sar picpic
        complexed with so4
        1. chain a [36048] picpiclink
        2. chain b [36049] picpiclink
      22. 1c54 picpic
        1. chain a [64764] picpiclink
  4. Cytotoxic RNase Sa3 [82563]
    1. Streptomyces aureofaciens [TaxId: 1894] [82564] (2)
      1. 1mgr picpic
        complexed with sul
        1. chain a [79106] picpiclink
      2. 1mgw picpic
        complexed with li
        1. chain a [79109] picpiclink
  5. Ribonuclease Sa2 [110767]
    1. Streptomyces aureofaciens [TaxId: 1894] [110768] (2)
      SQ Q53752
      1. 1pyl picpic
        complexed with so4
        1. chain a [104391] picpiclink
        2. chain b [104392] picpiclink
      2. 1py3 picpic
        complexed with so4
        1. chain a [104386] picpiclink
        2. chain b [104387] picpiclink
        3. chain c [104388] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk