Structural Classification of Proteins
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Family: rRNA adenine dimethylase-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: S-adenosyl-L-methionine-dependent methyltransferases [53334]
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. Superfamily: S-adenosyl-L-methionine-dependent methyltransferases [53335]
    link to SUPERFAMILY database - Superfamily
  5. Family: rRNA adenine dimethylase-like [88784]

Protein Domains:

  1. rRNA adenine dimethylase [53363]
    contains additional all-alpha C-terminal domain (res.181-248)
    1. Streptococcus pneumoniae, Ermam [TaxId: 1313] [53364] (1)
      1. 1yub picpic
        mutant
        1. chain a [34219] picpiclink
    2. Bacillus subtilis, Ermc' [TaxId: 1423] [53365] (5)
      1. 1qam picpic
        complexed with act
        1. chain a [34220] picpiclink
      2. 1qan picpic
        complexed with act, sah
        1. chain a [34221] picpiclink
      3. 1qao picpic
        complexed with sam
        1. chain a [34222] picpiclink
      4. 1qaq picpic
        complexed with sfg
        1. chain a [34223] picpiclink
      5. 2erc picpic
        1. chain a [34224] picpiclink
        2. chain b [34225] picpiclink
  2. Transcription factor sc-mtTFB [69555]
    overall structure is very similar to those of Ermc' and Ermam
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [69556] (1)
      1. 1i4w picpic
        complexed with xe
        1. chain a [66028] picpiclink
  3. High level kasugamycin resistance protein KsgA [110662]
    1. Escherichia coli [TaxId: 562] [110663] (1)
      SQ P06992
      1. 1qyr picpic
        1. chain a [104657] picpiclink
        2. chain b [104658] picpiclink
  4. Probable dimethyladenosine transferase [142575]
    1. Human (Homo sapiens) [TaxId: 9606] [142576] (2)
      SQ Q9UNQ2 36-313
      1. 1zq9 picpic
        complexed with sam
        1. region a:36-313 [125505] picpiclink
      2. 1zq9 picpic
        automatically matched to 1ZQ9 A:36-313
        complexed with sam
        1. region b:36-313 [125506] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk