Structural Classification of Proteins
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Family: C5 cytosine-specific DNA methylase, DCM

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: S-adenosyl-L-methionine-dependent methyltransferases [53334]
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. Superfamily: S-adenosyl-L-methionine-dependent methyltransferases [53335]
    link to SUPERFAMILY database - Superfamily
  5. Family: C5 cytosine-specific DNA methylase, DCM [88786]

Protein Domains:

  1. DNA methylase HhaI [53367]
    1. Haemophilus haemolyticus [TaxId: 726] [53368] (20)
      SQ P05102
      1. 2c7p picpic
        automatically matched to d10mha_
        complexed with 5cm, a1p, cit, epe, sah, so4
        1. region a:1-327 [130080] picpiclink
      2. 2c7q picpic
        automatically matched to d10mha_
        complexed with 5cm, a1p, cit, sah, so4
        1. region a:1-327 [130081] picpiclink
      3. 2c7o picpic
        automatically matched to d10mha_
        complexed with 5cm, a1p, sah, so4
        1. region a:1-327 [130079] picpiclink
      4. 2c7r picpic
        automatically matched to d1fjxa_
        complexed with 5cm, a1p, gol, sah, so4; mutant
        1. region a:1-327 [130082] picpiclink
      5. 1skm picpic
        complexed with hcx, sah
        1. chain a [105675] picpiclink
      6. 6mht picpic
        protein/DNA complex; complexed with 4sc, 5mc, sam
        1. chain a [34226] picpiclink
      7. 2hr1 picpic
        automatically matched to d10mha_
        complexed with sah
        1. region a:1-327 [136677] picpiclink
      8. 9mht picpic
        protein/DNA complex; complexed with ap, sah
        1. chain a [34227] picpiclink
      9. 1m0e picpic
        complexed with sah, z
        1. chain a [78332] picpiclink
      10. 1fjx picpic
        protein/DNA complex; complexed with sah, so4; mutant
        1. chain a [34228] picpiclink
      11. 1mht picpic
        protein/DNA complex; complexed with ch3, flo, sah, thm
        1. chain a [34236] picpiclink
      12. 7mht picpic
        protein/DNA complex; complexed with sah
        1. chain a [34231] picpiclink
      13. 4mht picpic
        protein/DNA complex; complexed with ch3, sah
        1. chain a [34230] picpiclink
      14. 10mh picpic
        protein/DNA complex; complexed with 5mc, 5nc, sah
        1. chain a [34232] picpiclink
      15. 1hmy picpic
        complexed with sam
        1. chain a [34229] picpiclink
      16. 8mht picpic
        protein/DNA complex; complexed with 2up, sah
        1. chain a [34233] picpiclink
      17. 3mht picpic
        protein/DNA complex; complexed with sah
        1. chain a [34234] picpiclink
      18. 5mht picpic
        protein/DNA complex; complexed with 5cm, sah
        1. chain a [34237] picpiclink
      19. 2hmy picpic
        complexed with sam
        1. chain b [34235] picpiclink
      20. 1svu picpic
        complexed with sah, so4, unx; mutant
        1. chain a [106052] picpiclink
        2. chain b [106053] picpiclink
  2. DNA methylase HaeIII [53371]
    1. Haemophilus aegyptius [TaxId: 197575] [53372] (1)
      1. 1dct picpic
        protein/DNA complex; complexed with ca, ch3, flo
        1. chain a [34244] picpiclink
        2. chain b [34245] picpiclink
  3. DNMT2 [53375]
    an enigmatic DNA methyltransferase homologue from mitochondria
    1. Human (Homo sapiens) [TaxId: 9606] [53376] (1)
      1. 1g55 picpic
        complexed with bme, cry, sah, so4; mutant
        1. chain a [34247] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk