Structural Classification of Proteins
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Family: Macro domain

found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Macro domain-like [52948]
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. Superfamily: Macro domain-like [52949]
    link to SUPERFAMILY database - Superfamily
  5. Family: Macro domain [89724]
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme

Protein Domains:

  1. Hypothetical protein AF1521 [89725]
    contains extra N-terminal strand
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [89726] (4) picpic
      SQ O28751
  2. Hypothetical protein YmbD [102530]
    1. Escherichia coli [TaxId: 562] [102531] (1) picpic
  3. Hypothetical protein Ymr087W [110654]
    contains structural variations at both termini
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110655] (3) picpic
      SQ Q04299
  4. Hypothetical protein BT1257 [142545]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [142546] (3) picpic
      SQ Q8A8B0 2-155
  5. Histone macro-H2a1.1 [142547]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [142548] (4) picpic
      SQ Q02874 180-370
    2. Human (Homo sapiens) [TaxId: 9606] [142549] (8) picpic
      SQ O75367 179-367! SQ O75367 181-371
  6. Replicase polyprotein 1ab [142550]
    1. SARS coronavirus [TaxId: 227859] [142551] (4) picpic
      SQ P59641 1002-1169
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk