Superfamily: Macro domain-like

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Macro domain-like [52948]
   3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
4. Superfamily: Macro domain-like [52949]
   uperfamily

Families:

1. Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52950] (2)
   1. Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52951]
      1. Cow (Bos taurus) [TaxId: 9913] [52952] (9)
      2. Escherichia coli, PepA [TaxId: 562] [75241] (1)
         involved in Xer site-specific recombination; probable DNA-binding domain
2. Macro domain [89724] (7)
   found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
   1. Hypothetical protein AF1521 [89725]
      contains extra N-terminal strand
      1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [89726] (4)
         SQ O28751
   2. Hypothetical protein YmbD [102530]
      1. Escherichia coli [TaxId: 562] [102531] (1)
   3. Hypothetical protein Ymr087W [110654]
      contains structural variations at both termini
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110655] (3)
         SQ Q04299
   4. Hypothetical protein BT1257 [142545]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [142546] (3)
         SQ Q8A8B0 2-155
   5. Histone macro-H2a1.1 [142547]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [142548] (4)
         SQ Q02874 180-370
      2. Human (Homo sapiens) [TaxId: 9606] [142549] (8)
         SQ O75367 179-367! SQ O75367 181-371
   6. Replicase polyprotein 1ab [142550]
      1. SARS coronavirus [TaxId: 227859] [142551] (4)
         SQ P59641 1002-1169

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk