Structural Classification of Proteins
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Fold: Macro domain-like

3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Macro domain-like [52948]
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest

Superfamilies:

  1. Macro domain-like [52949] (2)
    link to SUPERFAMILY database - Superfamily
    1. Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52950] (2)
      1. Leucine aminopeptidase (Aminopeptidase A), N-terminal domain [52951]
        1. Cow (Bos taurus) [TaxId: 9913] [52952] (9) picpic
        2. Escherichia coli, PepA [TaxId: 562] [75241] (1) picpic
          involved in Xer site-specific recombination; probable DNA-binding domain
    2. Macro domain [89724] (7)
      found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
      1. Hypothetical protein AF1521 [89725]
        contains extra N-terminal strand
        1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [89726] (4) picpic
          SQ O28751
      2. Hypothetical protein YmbD [102530]
        1. Escherichia coli [TaxId: 562] [102531] (1) picpic
      3. Hypothetical protein Ymr087W [110654]
        contains structural variations at both termini
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110655] (3) picpic
          SQ Q04299
      4. Hypothetical protein BT1257 [142545]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [142546] (3) picpic
          SQ Q8A8B0 2-155
      5. Histone macro-H2a1.1 [142547]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [142548] (4) picpic
          SQ Q02874 180-370
        2. Human (Homo sapiens) [TaxId: 9606] [142549] (8) picpic
          SQ O75367 179-367! SQ O75367 181-371
      6. Replicase polyprotein 1ab [142550]
        1. SARS coronavirus [TaxId: 227859] [142551] (4) picpic
          SQ P59641 1002-1169
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk