Structural Classification of Proteins
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Protein: Cobalamin biosynthesis protein CobE from Agrobacterium tumefaciens [TaxId: 358]

SQ A9CHC6 8-130
CobE orthologue Atu2797/ChiG; typo in the (mis)annotation

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: CobE/GbiG C-terminal domain-like [159663]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32154; strand 5 is antiparallel to the rest
  4. Superfamily: CobE/GbiG C-terminal domain-like [159664]
    probably involved in deacylation steps in both anaerobic and aerobic pathways of cobalamin biosynthesis
  5. Family: CobE/GbiG C-terminal domain-like [159665]
    C-terminal part of Pfam 01890 (CbiG); corresponds to standalone protein CobE in the aerobic pathway; also includes resent structure 3BY5
  6. Protein: Cobalamin biosynthesis protein CobE [159666]
    predicted to facilitate the deacylation of precorrin-5 intermediate; this step can proceed non-enzymatically in vitro
  7. Species: Agrobacterium tumefaciens [TaxId: 358] [159667]
    SQ A9CHC6 8-130
    CobE orthologue Atu2797/ChiG; typo in the (mis)annotation

PDB Entry Domains:

  1. 3by5 picpic
    complexed with so4
    1. region a:8-130 [155721] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk