Structural Classification of Proteins
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Protein: Pyruvate phosphate dikinase, central domain from Clostridium symbiosum [TaxId: 1512]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: The "swivelling" beta/beta/alpha domain [52008]
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. Superfamily: Phosphohistidine domain [52009]
    contains barrel, closed, n=7, S=10
    link to SUPERFAMILY database - Superfamily
  5. Family: Pyruvate phosphate dikinase, central domain [52010]
  6. Protein: Pyruvate phosphate dikinase, central domain [52011]
  7. Species: Clostridium symbiosum [TaxId: 1512] [52012]

PDB Entry Domains:

  1. 1kbl picpicxrefxref
    complexed with nh4, so4
    1. region a:377-509 [68385] picpiclink
  2. 1kc7 picpicxrefxref
    complexed with mg, ppr, so4
    1. region a:377-509 [68424] picpiclink
  3. 1dik picpicxrefxref
    complexed with so4
    1. region a:377-505 [30702] picpiclink
  4. 1ggo picpicxrefxref
    complexed with so4; mutant
    1. region a:377-505 [30703] picpiclink
  5. 2dik picpicxrefxref
    complexed with so4; mutant
    1. region a:377-505 [30704] picpiclink
  6. 2r82 picpicxrefxref
    automatically matched to d1kbla2
    complexed with so4; mutant
    1. region a:377-509 [151668] picpiclink
  7. 1jde picpicxrefxref
    complexed with so4; mutant
    1. region a:377-504 [66547] picpiclink
  8. 2fm4 picpic
    automatically matched to d1kbla2
    1. region a:384-509 [133760] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk