Superfamily: Glycoside hydrolase/deacetylase

in the different families beta-barrels are similarly distorted but may vary in the number of strands
uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: 7-stranded beta/alpha barrel [51988]
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
4. Superfamily: Glycoside hydrolase/deacetylase [88713]
   in the different families beta-barrels are similarly distorted but may vary in the number of strands
   uperfamily

Families:

1. 4-alpha-glucanotransferase, N-terminal domain [89554] (1)
   family 57 glycoside hydrolase; overall domain organization is similar to that of the alpha-mannosidase family
2. alpha-mannosidase [88714] (2)
   family 38 glycoside hydrolase; overall domain organization is similar to that of the 4-alpha-glucanotransferase family
3. AmyC N-terminal domain-like [102189] (2)
4. NodB-like polysaccharide deacetylase [89559] (6)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=6, S=8; strand order 123456
5. LamB/YcsF-like [117449] (3)
   Pfam 03746
6. PA1517-like [141965] (1)
   seven-stranded barrel with a detectable sequence similarity to the six-stranded barrel NodB-like family; member of the same Pfam family (Pfam 01522)
7. Divergent polysaccharide deacetylase [141968] (1)
   Pfam 04748
8. YdjC-like [159441] (1)
   Pfam 04794

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk