Structural Classification of Proteins
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Superfamily: Cobalamin (vitamin B12)-binding domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Flavodoxin-like [52171]
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. Superfamily: Cobalamin (vitamin B12)-binding domain [52242]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Cobalamin (vitamin B12)-binding domain [52243] (6)
    1. Methionine synthase, C-terminal domain [52244]
      1. Escherichia coli [TaxId: 562] [52245] (4) picpic
    2. Glutamate mutase, small subunit [52246]
      1. Clostridium tetanomorphum [TaxId: 1553] [52247] (3) picpic
      2. Clostridium cochlearium [TaxId: 1494] [52248] (4) picpic
    3. Methylmalonyl-CoA mutase alpha subunit, C-terminal domain [88717]
      active subunit; binds B12
      1. Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744] [88718] (8) picpic
    4. Methylmalonyl-CoA mutase beta subunit, C-terminal domain [88719]
      inactive subunit
      1. Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744] [88720] (8) picpic
    5. D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain [117477]
      most similar to the glutamate mutase subunit
      1. Clostridium sticklandii [TaxId: 1511] [117478] (1) picpic
        SQ Q9ZFE5
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk