Structural Classification of Proteins
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Protein: Riboflavin biosynthesis protein RibD from Bacillus subtilis [TaxId: 1423]

SQ P17618 1-145

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Cytidine deaminase-like [53926]
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. Superfamily: Cytidine deaminase-like [53927]
    contains extra C-terminal strand 5, order 21345
    link to SUPERFAMILY database - Superfamily
  5. Family: Deoxycytidylate deaminase-like [89800]
    strand 5 is parallel to strand 4
  6. Protein: Riboflavin biosynthesis protein RibD [142837]
  7. Species: Bacillus subtilis [TaxId: 1423] [142838]
    SQ P17618 1-145

PDB Entry Domains:

  1. 2b3z picpicxrefxrefxrefxref
    complexed with zn
    1. region a:1-145 [127808] picpiclink
  2. 2b3z picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with zn
    1. region b:1-145 [127810] picpiclink
  3. 2b3z picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with zn
    1. region c:1-145 [127812] picpiclink
  4. 2b3z picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with zn
    1. region d:1-145 [127814] picpiclink
  5. 2d5n picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with ndp, zn
    1. region a:1-145 [131274] picpiclink
  6. 2d5n picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with ndp, zn
    1. region b:1-145 [131276] picpiclink
  7. 2d5n picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with ndp, zn
    1. region c:1-145 [131278] picpiclink
  8. 2d5n picpicxrefxrefxrefxref
    automatically matched to 2B3Z A:1-145
    complexed with ndp, zn
    1. region d:1-145 [131280] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk