Structural Classification of Proteins
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Family: Cytidine deaminase

strand 5 is antiparallel to strand 4

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Cytidine deaminase-like [53926]
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. Superfamily: Cytidine deaminase-like [53927]
    contains extra C-terminal strand 5, order 21345
    link to SUPERFAMILY database - Superfamily
  5. Family: Cytidine deaminase [53928]
    strand 5 is antiparallel to strand 4

Protein Domains:

  1. mono-domain cytidine deaminase [75327]
    1. Bacillus subtilis [TaxId: 1423] [75328] (4) picpic
      SQ P19079
    2. Human (Homo sapiens) [TaxId: 9606] [102711] (1) picpic
    3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110764] (1) picpic
      SQ Q06549
    4. Bacillus anthracis [TaxId: 1392] [142829] (2) picpic
      SQ Q81LT6 1-124
    5. Mouse (Mus musculus) [TaxId: 10090] [142830] (12) picpic
      SQ P56389 10-146
  2. Two-domain cytidine deaminase [53929]
    duplication: consists of two similar domains; contains extra helices in the N-terminal domain
    1. Escherichia coli [TaxId: 562] [53930] (4) picpic
  3. Blasticidin-S deaminase [142831]
    1. Aspergillus terreus [TaxId: 33178] [142832] (14) picpic
      SQ P78986 2-126
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk