Structural Classification of Proteins
home mail help root up expand collapse

Protein: Spermidine/putrescine-binding protein PotD from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like II [53849]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily: Periplasmic binding protein-like II [53850]
    Similar in architecture to the superfamily I but partly differs in topology
    link to SUPERFAMILY database - Superfamily
  5. Family: Phosphate binding protein-like [53851]
  6. Protein: Spermidine/putrescine-binding protein PotD [53875]
  7. Species: Escherichia coli [TaxId: 562] [53876]

PDB Entry Domains:

  1. 1pot picpic
    complexed with spd
    1. chain a [35807] picpiclink
  2. 1poy picpic
    complexed with spd
    1. chain 1 [35808] picpiclink
    2. chain 2 [35809] picpiclink
    3. chain 3 [35810] picpiclink
    4. chain 4 [35811] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk