Structural Classification of Proteins
home mail help root up expand collapse

Fold: Periplasmic binding protein-like I

consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
parallel beta-sheet of 6 strands, order 213456

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like I [53821]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456

Superfamilies:

  1. Periplasmic binding protein-like I [53822] (1)
    Similar in architecture to the superfamily II but partly differs in topology
    link to SUPERFAMILY database - Superfamily
    1. L-arabinose binding protein-like [53823] (18)
      1. D-ribose-binding protein [53824]
        1. Escherichia coli, strain k-12 [TaxId: 562] [53825] (6) picpic
      2. L-arabinose-binding protein [53826]
        1. Escherichia coli [TaxId: 562] [53827] (9) picpic
      3. D-allose-binding protein [53828]
        1. Escherichia coli [TaxId: 562] [53829] (3) picpic
      4. Galactose/glucose-binding protein [53830]
        1. Escherichia coli [TaxId: 562] [53831] (6) picpic
        2. Salmonella typhimurium, strain lt2 [TaxId: 90371] [53832] (3) picpic
      5. Amide receptor/negative regulator of the amidase operon (AmiC) [53833]
        1. Pseudomonas aeruginosa [TaxId: 287] [53834] (3) picpic
      6. Quorum-sensing signal (autoinducer-2) binding protein LuxP [69622]
        1. Vibrio harveyi [TaxId: 669] [69623] (4) picpic
      7. Purine repressor (PurR), C-terminal domain [53835]
        1. Escherichia coli [TaxId: 562] [53836] (24) picpic
      8. Lac-repressor (lacR) core (C-terminal domain) [53837]
        1. Escherichia coli [TaxId: 562] [53838] (16) picpic
      9. Trehalose repressor, C-terminal domain [53839]
        1. Escherichia coli [TaxId: 562] [53840] (1) picpic
      10. Leucine-,isoleucine-,valine-binding (LIV) protein [53841]
        1. Escherichia coli [TaxId: 562] [53842] (1) picpic
      11. Leucine-binding protein [53843]
        1. Escherichia coli [TaxId: 562] [53844] (4) picpic
      12. Hormone binding domain of the atrial natriuretic peptide receptor [53845]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [53846] (2) picpic
          SQ P18910 29-454
        2. Human (Homo sapiens) [TaxId: 9606] [64190] (2) picpic
      13. Metabotropic glutamate receptor subtype 1 [53847]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [53848] (5) picpic
      14. AI-2 receptor LsrB [110745]
        1. Salmonella typhi [TaxId: 90370] [110746] (2) picpic
          SQ Q8Z2X8 27-340
      15. Glucose-resistance amylase regulator CcpA, C-terminal domain [117740]
        1. Bacillus megaterium [TaxId: 1404] [117741] (11) picpic
          SQ P46828 58-322 ! SQ P46828
      16. YraM C-terminal domain [159804]
        1. Haemophilus influenzae [TaxId: 727] [159805] (1) picpic
          SQ P45299 257-573
          HI1655
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk