Structural Classification of Proteins
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Protein: Diphthine synthase, DphB from Pyrococcus horikoshii [TaxId: 53953]

SQ O58456 1-265

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Tetrapyrrole methylase [53789]
    consists of two non-similar domains
    Domain 1 has parallel sheet of 5 strands, order 32415
    Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest
  4. Superfamily: Tetrapyrrole methylase [53790]
    link to SUPERFAMILY database - Superfamily
  5. Family: Tetrapyrrole methylase [53791]
    Pfam 00590
  6. Protein: Diphthine synthase, DphB [102684]
    diphthamide biosynthesis methyltransferase
  7. Species: Pyrococcus horikoshii [TaxId: 53953] [142779]
    SQ O58456 1-265

PDB Entry Domains:

  1. 2dek picpic
    automatically matched to 1VCE A:1-265
    complexed with na, sah
    1. region a:1-265 [131430] picpiclink
  2. 2dek picpic
    automatically matched to 1VCE A:1-265
    complexed with na, sah
    1. region b:1-265 [131431] picpiclink
  3. 1wng picpic
    automatically matched to 1VCE A:1-265
    complexed with sah, so4
    1. region a:1-265 [121092] picpiclink
  4. 1wng picpic
    automatically matched to 1VCE A:1-265
    complexed with sah, so4
    1. region b:1-265 [121093] picpiclink
  5. 1vce picpic
    complexed with sah
    1. region a:1-265 [119972] picpiclink
  6. 1vce picpic
    automatically matched to 1VCE A:1-265
    complexed with sah
    1. region b:1-265 [119973] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk