Fold: Tetrapyrrole methylase

consists of two non-similar domains
Domain 1 has parallel sheet of 5 strands, order 32415
Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a/b) [51349]
   Mainly parallel beta sheets (beta-alpha-beta units)
3. Fold: Tetrapyrrole methylase [53789]
   consists of two non-similar domains
   Domain 1 has parallel sheet of 5 strands, order 32415
   Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest

Superfamilies:

1. Tetrapyrrole methylase [53790] (1)
   uperfamily
   1. Tetrapyrrole methylase [53791] (10)
      Pfam 00590
      1. Cobalt precorrin-4 methyltransferase CbiF [53792]
         1. Bacillus megaterium [TaxId: 1404] [53793] (2)
            1. 1cbf
               complexed with po4, sah; mutant
               1. chain a [35587]
            2. 2cbf
               complexed with sah
               1. chain a [35588]
      2. Siroheme synthase CysG, domains 4 and 5 [102682]
         1. Salmonella typhimurium [TaxId: 90371] [102683] (3)
            1. 1pjq
               complexed with act, pge, sah
               1. region a:216-457 [94767]
               2. region b:216-457 [94770]
            2. 1pjs
               complexed with nad, pge, po4, sah
               1. region a:216-457 [94773]
               2. region b:216-457 [94776]
            3. 1pjt
               complexed with po4, sah; mutant
               1. region a:216-457 [94779]
               2. region b:216-457 [94782]
      3. Diphthine synthase, DphB [102684]
         diphthamide biosynthesis methyltransferase
         1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [102685] (1)
            1. 1vhv
               1. chain a [100704]
               2. chain b [100705]
         2. Aeropyrum pernix [TaxId: 56636] [117735] (1)
            SQ Q9YDI2; APE0931
            1. 1wde
               Structural genomics target
               1. chain a [114534]
         3. Pyrococcus horikoshii [TaxId: 53953] [142779] (6)
            SQ O58456 1-265
            1. 2dek
               automatically matched to 1VCE A:1-265
               complexed with na, sah
               1. region a:1-265 [131430]
            2. 2dek
               automatically matched to 1VCE A:1-265
               complexed with na, sah
               1. region b:1-265 [131431]
            3. 1wng
               automatically matched to 1VCE A:1-265
               complexed with sah, so4
               1. region a:1-265 [121092]
            4. 1wng
               automatically matched to 1VCE A:1-265
               complexed with sah, so4
               1. region b:1-265 [121093]
            5. 1vce
               complexed with sah
               1. region a:1-265 [119972]
            6. 1vce
               automatically matched to 1VCE A:1-265
               complexed with sah
               1. region b:1-265 [119973]
      4. Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) [117736]
         1. Pseudomonas denitrificans [TaxId: 43306] [117737] (1)
            SQ P21631
            1. 1s4d
               complexed with gol, sah
               1. chain a [112011]
               2. chain b [112012]
               3. chain d [112013]
               4. chain e [112014]
               5. chain f [112015]
               6. chain g [112016]
               7. chain h [112017]
               8. chain i [112018]
               9. chain j [112019]
               10. chain k [112020]
               11. chain l [112021]
               12. chain m [112022]
         2. Thermus thermophilus [TaxId: 274] [142780] (2)
            SQ Q53WA2 1-235
            1. 1ve2
               1. region a:1-235 [120008]
            2. 1ve2
               automatically matched to 1VE2 A:1-235
               1. region b:2-231 [120009]
      5. Hypothetical protein TTHA0667 [142781]
         strong sequence similarity to the CysG domain
         1. Thermus thermophilus [TaxId: 274] [142782] (4)
            SQ Q5SKH6 2-226
            1. 1va0
               automatically matched to 1V9A A:2-226
               complexed with cl, edo
               1. region a:2-226 [119899]
            2. 1va0
               automatically matched to 1V9A A:2-226
               complexed with cl, edo
               1. region b:2-226 [119900]
            3. 1v9a
               complexed with flc, sah
               1. region a:2-226 [119885]
            4. 1v9a
               automatically matched to 1V9A A:2-226
               complexed with flc, sah
               1. region b:2-226 [119886]
      6. Putative methytransferase BT4190 [142783]
         1. Bacteroides thetaiotaomicron [TaxId: 818] [142784] (4)
            SQ Q8A031 2-234
            1. 1wyz
               1. region a:2-234 [121471]
            2. 1wyz
               automatically matched to 1WYZ A:2-234
               1. region b:2-234 [121472]
            3. 1wyz
               automatically matched to 1WYZ A:2-234
               1. region c:2-234 [121473]
            4. 1wyz
               automatically matched to 1WYZ A:2-234
               1. region d:2-234 [121474]
      7. Precorrin-6y methylase CbiE [142785]
         1. Archaeoglobus fulgidus [TaxId: 2234] [142786] (2)
            SQ O29536 1-195
            1. 2bb3
               complexed with sah
               1. region a:1-195 [128257]
            2. 2bb3
               automatically matched to 2BB3 A:1-195
               complexed with sah
               1. region b:1-195 [128258]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk