Structural Classification of Proteins
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Fold: Formate dehydrogenase/DMSO reductase, domains 1-3

contains of two similar intertwined domains related by pseudo dyad; duplication
core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705]
    contains of two similar intertwined domains related by pseudo dyad; duplication
    core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

Superfamilies:

  1. Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1)
    molybdopterine enzyme
    link to SUPERFAMILY database - Superfamily
    1. Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (12)
      domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
      1. Dimethylsulfoxide reductase (DMSO reductase) [53708]
        1. Rhodobacter sphaeroides [TaxId: 1063] [53709] (1) picpic
        2. Rhodobacter capsulatus [TaxId: 1061] [53710] (10) picpic
      2. Formate dehydrogenase H [53711]
        1. Escherichia coli [TaxId: 562] [53712] (4) picpic
      3. Formate dehydrogenase N, alpha subunit [75317]
        1. Escherichia coli [TaxId: 562] [75318] (2) picpic
      4. Tungsten containing formate dehydrogenase, large subunit [82536]
        1. Desulfovibrio gigas [TaxId: 879] [82537] (1) picpic
      5. Trimethylamine N-oxide reductase [53713]
        1. Shewanella massilia [TaxId: 76854] [53714] (1) picpic
      6. Arsenite oxidase large subunit [53715]
        1. Alcaligenes faecalis [TaxId: 511] [53716] (2) picpic
      7. Periplasmic nitrate reductase alpha chain [53717]
        1. Desulfovibrio desulfuricans [TaxId: 876] [53718] (8) picpic
          dissimilatory nitrate reductase (NAP)
        2. Rhodobacter sphaeroides [TaxId: 1063] [102672] (1) picpic
      8. Respiratory nitrate reductase 1 alpha chain [102673]
        1. Escherichia coli [TaxId: 562] [102674] (7) picpic
          SQ P09152
      9. Transhydroxylase alpha subunit, AthL [110729]
        1. Pelobacter acidigallici [TaxId: 35816] [110730] (6) picpic
          SQ P80563
      10. NADH-quinone oxidoreductase chain 3, Nqo3 [142751]
        1. Thermus thermophilus [TaxId: 274] [142752] (4) picpic
          SQ Q56223 247-685
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk