Structural Classification of Proteins
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Family: Ngr ectodomain-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046]
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. Superfamily: L domain-like [52058]
    less regular structure consisting of variable repeats
    link to SUPERFAMILY database - Superfamily
  5. Family: Ngr ectodomain-like [75142]

Protein Domains:

  1. von Willebrand factor binding domain of glycoprotein Ib alpha [75143]
    1. Human (Homo sapiens) [TaxId: 9606] [75144] (9)
      1. 1p9a picpic
        complexed with man, nag; mutant
        1. chain g [87990] picpiclink
      2. 1m0z picpic
        mutant
        1. chain a [74359] picpiclink
        2. chain b [74360] picpiclink
      3. 1ook picpicxref
        complexed with cl, man, nag, tys; mutant
        1. chain g [87200] picpiclink
      4. 1sq0 picpicxref
        mutant
        1. chain b [98960] picpiclink
      5. 1p8v picpicxref
        complexed with dfp, mes, nag, tys; mutant
        1. chain a [87985] picpiclink
      6. 1qyy picpic
        complexed with man, nag, pt; mutant
        1. chain a [96605] picpiclink
        2. chain g [96606] picpiclink
      7. 1u0n picpicxrefxrefxref
        automatically matched to d1m0za_
        mutant
        1. region d:1-265 [119408] picpiclink
      8. 1m10 picpicxref
        mutant
        1. chain b [74362] picpiclink
      9. 1gwb picpic
        complexed with acy, nag, ndg, pt, so4, sty
        1. chain a [76362] picpiclink
        2. chain b [76363] picpiclink
  2. Reticulon 4 receptor (Nogo-66 receptor, Ngr) [89567]
    1. Human (Homo sapiens) [TaxId: 9606] [89568] (2)
      1. 1ozn picpic
        complexed with acy, man, nag
        1. chain a [87621] picpiclink
      2. 1p8t picpic
        complexed with nag
        1. chain a [87982] picpiclink
  3. Slit [117461]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [117462] (1)
      SQ P24014 542-733
      1. 1w8a picpic
        3rd LRR domain
        1. chain a [114363] picpiclink
  4. Decorin [117463]
    1. Cow (Bos taurus) [TaxId: 9913] [117464] (3)
      SQ P21793 52-356
      1. 1xku picpic
        complexed with nag, tmn
        1. chain a [115425] picpiclink
      2. 1xcd picpic
        complexed with nag, tmn
        1. chain a [115117] picpiclink
      3. 1xec picpic
        complexed with nag
        1. chain a [115227] picpiclink
        2. chain b [115228] picpiclink
  5. High affinity nerve growth factor receptor, N-terminal domain [141992]
    1. Human (Homo sapiens) [TaxId: 9606] [141993] (2)
      SQ P04629 36-191
      1. 2ifg picpicxrefxrefxrefxrefxrefxref
        complexed with bma, man, nag, ndg
        1. region a:36-191 [137337] picpiclink
      2. 2ifg picpicxrefxrefxrefxrefxrefxref
        automatically matched to 2IFG A:36-191
        complexed with bma, man, nag, ndg
        1. region b:36-191 [137340] picpiclink
  6. Follicle-stimulating hormone receptor [159450]
    1. Human (Homo sapiens) [TaxId: 9606] [159451] (1)
      SQ P23945 18-259
      1. 1xwd picpicxrefxrefxrefxref
        complexed with bma, nag, so4
        1. region c:18-259 [144581] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk